Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 AC131274.2-201ENST00000580697 1507 ntBASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-4A0A0B4J246 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 ALDH1A3-203ENST00000557963 1670 ntBASIC15.38■□□□□ 0.05
TRAV8-4A0A0B4J246 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 AC137767.1-201ENST00000602918 1920 ntBASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-4A0A0B4J246 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 AF131216.4-201ENST00000638924 1588 ntBASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-4A0A0B4J246 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 AC004448.1-201ENST00000458332 883 ntBASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-4A0A0B4J246 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms