Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PES1P2-201ENST00000449745 1735 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 TBC1D27-202ENST00000424239 1573 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 AC243964.3-201ENST00000623022 2028 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PABPC1P2-201ENST00000471997 1805 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 AP002008.2-201ENST00000635926 4870 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 MIR658-201ENST00000385210 100 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 AC099336.1-201ENST00000417053 1171 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 RPS9P1-201ENST00000419943 583 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 YBX1P6-201ENST00000442962 1002 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 KRT223P-202ENST00000449164 1292 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 AC021723.1-201ENST00000486306 515 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 IGHV3-71-201ENST00000523324 359 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 AL022334.2-201ENST00000610000 484 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 AL023803.2-201ENST00000620080 638 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 COX11-210ENST00000639671 696 ntBASIC10.94□□□□□ -0.66
RAB40CQ96S21 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 DDC-206ENST00000431062 1620 ntTSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RAB40CQ96S21 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RAB40CQ96S21 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 KC6-207ENST00000600644 2311 ntTSL 3 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 OR8S1-201ENST00000310194 1080 ntBASIC10.93□□□□□ -0.66
RAB40CQ96S21 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 OR8T1P-201ENST00000421347 918 ntBASIC10.93□□□□□ -0.66
RAB40CQ96S21 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 KRT8P1-201ENST00000557533 1207 ntBASIC10.93□□□□□ -0.66
RAB40CQ96S21 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms