Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.75□□□□□ -0.37
CLK1P49759 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.75□□□□□ -0.37
CLK1P49759 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 AP002008.2-201ENST00000635926 4870 ntBASIC12.75□□□□□ -0.37
CLK1P49759 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLK1P49759 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.74□□□□□ -0.37
CLK1P49759 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.74□□□□□ -0.37
CLK1P49759 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.74□□□□□ -0.37
CLK1P49759 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.74□□□□□ -0.37
CLK1P49759 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 KRT18P9-201ENST00000604826 1300 ntBASIC12.74□□□□□ -0.37
CLK1P49759 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 RPSAP15-201ENST00000448168 861 ntBASIC12.74□□□□□ -0.37
CLK1P49759 SPTLC1P5-201ENST00000450718 252 ntBASIC12.74□□□□□ -0.37
CLK1P49759 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.74□□□□□ -0.37
CLK1P49759 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.74□□□□□ -0.37
CLK1P49759 HIST2H2BC-201ENST00000498492 580 ntBASIC12.74□□□□□ -0.37
CLK1P49759 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.74□□□□□ -0.37
CLK1P49759 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CLK1P49759 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.74□□□□□ -0.37
CLK1P49759 PHBP15-201ENST00000574228 665 ntBASIC12.74□□□□□ -0.37
CLK1P49759 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
CLK1P49759 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.74□□□□□ -0.37
CLK1P49759 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 HSPA8P9-201ENST00000485881 1943 ntBASIC12.74□□□□□ -0.37
CLK1P49759 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLK1P49759 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 AC015909.3-201ENST00000572855 1794 ntBASIC12.74□□□□□ -0.37
CLK1P49759 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC12.74□□□□□ -0.37
CLK1P49759 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLK1P49759 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 AC004554.1-201ENST00000422830 1468 ntBASIC12.73□□□□□ -0.37
CLK1P49759 AC025183.3-201ENST00000623526 1482 ntBASIC12.73□□□□□ -0.37
CLK1P49759 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 LINC00265-2P-201ENST00000413372 782 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms