Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 FGFR3P1-201ENST00000449999 601 ntBASIC13.51□□□□□ -0.25
APOA4P06727 RN7SL375P-201ENST00000492442 298 ntBASIC13.51□□□□□ -0.25
APOA4P06727 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.51□□□□□ -0.25
APOA4P06727 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.51□□□□□ -0.25
APOA4P06727 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 PRKXP1-201ENST00000561423 1122 ntBASIC13.51□□□□□ -0.25
APOA4P06727 AC138894.2-201ENST00000602838 371 ntBASIC13.51□□□□□ -0.25
APOA4P06727 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 AC084781.1-201ENST00000613737 656 ntBASIC13.51□□□□□ -0.25
APOA4P06727 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
APOA4P06727 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOA4P06727 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.51□□□□□ -0.25
APOA4P06727 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC13.51□□□□□ -0.25
APOA4P06727 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 POM121L4P-202ENST00000427789 1891 ntBASIC13.5□□□□□ -0.25
APOA4P06727 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.5□□□□□ -0.25
APOA4P06727 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
APOA4P06727 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.5□□□□□ -0.25
APOA4P06727 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.5□□□□□ -0.25
APOA4P06727 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.5□□□□□ -0.25
APOA4P06727 AC092506.1-202ENST00000401022 528 ntBASIC13.5□□□□□ -0.25
APOA4P06727 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOA4P06727 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.5□□□□□ -0.25
APOA4P06727 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.5□□□□□ -0.25
APOA4P06727 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.5□□□□□ -0.25
APOA4P06727 AC005077.3-201ENST00000449614 213 ntBASIC13.5□□□□□ -0.25
APOA4P06727 NOC2LP1-201ENST00000450578 752 ntBASIC13.5□□□□□ -0.25
APOA4P06727 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.5□□□□□ -0.25
APOA4P06727 AC100858.1-201ENST00000514059 1228 ntBASIC13.5□□□□□ -0.25
APOA4P06727 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.5□□□□□ -0.25
APOA4P06727 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
APOA4P06727 AC007250.1-201ENST00000608934 338 ntBASIC13.5□□□□□ -0.25
APOA4P06727 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
APOA4P06727 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.5□□□□□ -0.25
APOA4P06727 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms