Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 AC020931.1-201ENST00000589622 1346 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 RPE-208ENST00000436630 1128 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 MIR4746-201ENST00000579802 71 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 AL139339.2-201ENST00000608063 657 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 MFSD12-215ENST00000615613 688 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 AC060814.4-201ENST00000594169 2163 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 BEND3P3-201ENST00000611030 2440 ntBASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.28■□□□□ 0.2
HMG20BQ9P0W2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 AL157832.2-205ENST00000597245 1649 ntBASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 PEG13-201ENST00000631594 5667 ntBASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 SNORA50D-201ENST00000408059 134 ntBASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 AC091304.3-201ENST00000566500 716 ntBASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 SNORA50D-202ENST00000627561 132 ntBASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 DUX4L33-201ENST00000635217 958 ntBASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HMG20BQ9P0W2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 Z97653.2-201ENST00000623057 1418 ntBASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HMG20BQ9P0W2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMG20BQ9P0W2 MKRN7P-201ENST00000433469 1371 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms