Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 POM121L4P-202ENST00000427789 1891 ntBASIC16.32■□□□□ 0.2
PDE6BP35913 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC16.32■□□□□ 0.2
PDE6BP35913 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC16.32■□□□□ 0.2
PDE6BP35913 NUP210P2-201ENST00000510577 282 ntBASIC16.32■□□□□ 0.2
PDE6BP35913 DERL1-204ENST00000519018 575 ntTSL 4 BASIC16.32■□□□□ 0.2
PDE6BP35913 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDE6BP35913 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC16.32■□□□□ 0.2
PDE6BP35913 IGHV3OR16-11-201ENST00000565524 349 ntBASIC16.32■□□□□ 0.2
PDE6BP35913 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC16.32■□□□□ 0.2
PDE6BP35913 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 SNORD55-201ENST00000581525 80 ntBASIC16.32■□□□□ 0.2
PDE6BP35913 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 AL158032.2-201ENST00000616818 195 ntBASIC16.32■□□□□ 0.2
PDE6BP35913 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PDE6BP35913 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDE6BP35913 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDE6BP35913 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.32■□□□□ 0.2
PDE6BP35913 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC16.32■□□□□ 0.2
PDE6BP35913 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PDE6BP35913 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 AC244154.1-201ENST00000620148 1555 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDE6BP35913 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC16.31■□□□□ 0.2
PDE6BP35913 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC16.31■□□□□ 0.2
PDE6BP35913 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.31■□□□□ 0.2
PDE6BP35913 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 RN7SL87P-201ENST00000497657 288 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC16.31■□□□□ 0.2
PDE6BP35913 AC105424.1-201ENST00000514583 209 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 FOS-205ENST00000555242 629 ntTSL 2 BASIC16.31■□□□□ 0.2
PDE6BP35913 AC018868.2-201ENST00000559655 1259 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 MIR4763-201ENST00000581461 92 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC16.31■□□□□ 0.2
PDE6BP35913 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC16.31■□□□□ 0.2
PDE6BP35913 AC009779.7-201ENST00000609031 469 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 AC090093.1-201ENST00000611315 271 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 AC020763.2-201ENST00000623155 1255 ntBASIC16.31■□□□□ 0.2
PDE6BP35913 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.31■□□□□ 0.2
PDE6BP35913 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.31■□□□□ 0.2
PDE6BP35913 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.31■□□□□ 0.2
PDE6BP35913 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDE6BP35913 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDE6BP35913 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PDE6BP35913 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PDE6BP35913 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC16.3■□□□□ 0.2
PDE6BP35913 BCRP5-201ENST00000514371 253 ntBASIC16.3■□□□□ 0.2
PDE6BP35913 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC16.3■□□□□ 0.2
PDE6BP35913 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 AC106782.3-201ENST00000563429 258 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms