Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC8.46□□□□□ -1.06
PCP4P48539 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 TFAP2A-203ENST00000379613 3317 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 PDXDC1-202ENST00000396410 4521 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 HLA-A-201ENST00000376802 1334 ntBASIC8.46□□□□□ -1.06
PCP4P48539 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC8.46□□□□□ -1.06
PCP4P48539 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PCP4P48539 KIAA0141-202ENST00000432126 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 AC097662.1-201ENST00000439598 2568 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PCP4P48539 AC087525.1-202ENST00000559821 1988 ntTSL 5 BASIC8.46□□□□□ -1.06
PCP4P48539 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 CNDP2-202ENST00000324301 2349 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PCP4P48539 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 HCP5B-201ENST00000630472 1889 ntBASIC8.45□□□□□ -1.06
PCP4P48539 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 AL139158.3-201ENST00000641212 1562 ntBASIC8.45□□□□□ -1.06
PCP4P48539 RIPOR2-201ENST00000259698 5471 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 CCDC174-206ENST00000611584 2720 ntTSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 ESRRAP1-201ENST00000400596 1257 ntBASIC8.45□□□□□ -1.06
PCP4P48539 CNN2P8-201ENST00000421872 913 ntBASIC8.45□□□□□ -1.06
PCP4P48539 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 PON3-205ENST00000451904 1053 ntTSL 3 BASIC8.45□□□□□ -1.06
PCP4P48539 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 LDHBP3-201ENST00000514909 822 ntBASIC8.45□□□□□ -1.06
PCP4P48539 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 AL160237.2-201ENST00000556165 472 ntBASIC8.45□□□□□ -1.06
PCP4P48539 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC8.45□□□□□ -1.06
PCP4P48539 ABHD17AP7-201ENST00000569060 595 ntBASIC8.45□□□□□ -1.06
PCP4P48539 STK25P1-201ENST00000585406 838 ntBASIC8.45□□□□□ -1.06
PCP4P48539 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC8.45□□□□□ -1.06
PCP4P48539 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC8.45□□□□□ -1.06
PCP4P48539 U85056.1-201ENST00000616429 682 ntBASIC8.45□□□□□ -1.06
PCP4P48539 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC8.45□□□□□ -1.06
PCP4P48539 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 AL360270.3-201ENST00000609118 1348 ntBASIC8.45□□□□□ -1.06
PCP4P48539 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 ACSL6-203ENST00000379240 2548 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC8.45□□□□□ -1.06
PCP4P48539 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 GC-204ENST00000504199 1777 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 HDAC6-203ENST00000376619 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 ARHGAP25-207ENST00000467265 2247 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 ANTXRLP1-201ENST00000604933 1829 ntBASIC8.45□□□□□ -1.06
PCP4P48539 STK17B-202ENST00000409228 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC8.45□□□□□ -1.06
PCP4P48539 KRT8P37-201ENST00000451609 1420 ntBASIC8.45□□□□□ -1.06
PCP4P48539 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC8.45□□□□□ -1.06
PCP4P48539 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PCP4P48539 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PCP4P48539 TIGIT-206ENST00000486257 3149 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PCP4P48539 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms