RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 NISCHQ9Y2I1 1504 aa17.64■□□□□ 0.41
TMPRSS4-220ENST00000618855 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
TMPRSS4-220ENST00000618855 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
TMPRSS4-220ENST00000618855 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
TMPRSS4-220ENST00000618855 PCGF6Q9BYE7 350 aa15.85■□□□□ 0.13
TMPRSS4-220ENST00000618855 HRCP23327 699 aa15.82■□□□□ 0.12
TMPRSS4-220ENST00000618855 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
TMPRSS4-220ENST00000618855 PPARGC1BQ86YN6 1023 aaKnown RBP15.7■□□□□ 0.1
TMPRSS4-220ENST00000618855 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
TMPRSS4-220ENST00000618855 CHIC1Q5VXU3 224 aa15.33■□□□□ 0.04
TMPRSS4-220ENST00000618855 FAM9AQ8IZU1 332 aaPredicted RBP15.3■□□□□ 0.04
TMPRSS4-220ENST00000618855 LOC105371045A0A1W2PR82 267 aa15.21■□□□□ 0.03
TMPRSS4-220ENST00000618855 ABCC9O60706 1549 aa15.17■□□□□ 0.02
TMPRSS4-220ENST00000618855 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
TMPRSS4-220ENST00000618855 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
TMPRSS4-220ENST00000618855 TRIM26Q12899 539 aaPredicted RBP15.09■□□□□ 0.01
TMPRSS4-220ENST00000618855 TTBK1Q5TCY1 1321 aaPredicted RBP15.03■□□□□ -0
TMPRSS4-220ENST00000618855 ZEB1P37275 1124 aaPredicted RBP15.01□□□□□ -0.01
TMPRSS4-220ENST00000618855 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
TMPRSS4-220ENST00000618855 MYT1Q01538 1121 aa14.92□□□□□ -0.02
TMPRSS4-220ENST00000618855 RANGAP1P46060 587 aaPredicted RBP14.9□□□□□ -0.02
TMPRSS4-220ENST00000618855 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
TMPRSS4-220ENST00000618855 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
TMPRSS4-220ENST00000618855 DCAF1Q9Y4B6 1507 aa14.75□□□□□ -0.05
TMPRSS4-220ENST00000618855 CCER1Q8TC90 406 aaPredicted RBP14.75□□□□□ -0.05
TMPRSS4-220ENST00000618855 GTF3C3Q9Y5Q9 886 aa14.73□□□□□ -0.05
TMPRSS4-220ENST00000618855 ACIN1Q9UKV3 1341 aaKnown RBP14.69□□□□□ -0.06
TMPRSS4-220ENST00000618855 YTHDC1Q96MU7 727 aaKnown RBP14.68□□□□□ -0.06
TMPRSS4-220ENST00000618855 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
TMPRSS4-220ENST00000618855 NEUROD1Q13562 356 aa14.67□□□□□ -0.06
TMPRSS4-220ENST00000618855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
TMPRSS4-220ENST00000618855 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
TMPRSS4-220ENST00000618855 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
TMPRSS4-220ENST00000618855 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
TMPRSS4-220ENST00000618855 UBTFP17480 764 aaKnown RBP14.43□□□□□ -0.1
TMPRSS4-220ENST00000618855 ATP1B4Q9UN42 357 aaPredicted RBP14.29□□□□□ -0.12
TMPRSS4-220ENST00000618855 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
TMPRSS4-220ENST00000618855 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
TMPRSS4-220ENST00000618855 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
TMPRSS4-220ENST00000618855 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
TMPRSS4-220ENST00000618855 MIER1Q8N108 512 aa14.14□□□□□ -0.15
TMPRSS4-220ENST00000618855 APLP2Q06481 763 aa14.11□□□□□ -0.15
TMPRSS4-220ENST00000618855 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
TMPRSS4-220ENST00000618855 ITGAEP38570 1179 aa14.09□□□□□ -0.15
TMPRSS4-220ENST00000618855 BCANQ96GW7 911 aa14□□□□□ -0.17
TMPRSS4-220ENST00000618855 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
TMPRSS4-220ENST00000618855 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
TMPRSS4-220ENST00000618855 ARID3CA6NKF2 412 aa13.91□□□□□ -0.18
TMPRSS4-220ENST00000618855 ANP32EQ9BTT0 268 aa13.91□□□□□ -0.18
TMPRSS4-220ENST00000618855 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
TMPRSS4-220ENST00000618855 SUPT16HQ9Y5B9 1047 aaKnown RBP13.85□□□□□ -0.19
TMPRSS4-220ENST00000618855 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
TMPRSS4-220ENST00000618855 ERICH6Q7L0X2 663 aa13.83□□□□□ -0.2
TMPRSS4-220ENST00000618855 NEFLP07196 543 aa13.83□□□□□ -0.2
TMPRSS4-220ENST00000618855 NACADO15069 1562 aa13.81□□□□□ -0.2
TMPRSS4-220ENST00000618855 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
TMPRSS4-220ENST00000618855 WIZO95785 1651 aa13.77□□□□□ -0.21
TMPRSS4-220ENST00000618855 FBLN2P98095 1184 aa13.74□□□□□ -0.21
TMPRSS4-220ENST00000618855 FKBP8Q14318 412 aa13.74□□□□□ -0.21
TMPRSS4-220ENST00000618855 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
TMPRSS4-220ENST00000618855 CEP162Q5TB80 1403 aa13.71□□□□□ -0.21
TMPRSS4-220ENST00000618855 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
TMPRSS4-220ENST00000618855 CLSPNQ9HAW4 1339 aa13.7□□□□□ -0.22
TMPRSS4-220ENST00000618855 SOGA1O94964 1423 aa13.7□□□□□ -0.22
TMPRSS4-220ENST00000618855 CCDC88BA6NC98 1476 aa13.64□□□□□ -0.23
TMPRSS4-220ENST00000618855 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
TMPRSS4-220ENST00000618855 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
TMPRSS4-220ENST00000618855 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
TMPRSS4-220ENST00000618855 TRIM52Q96A61 297 aa13.58□□□□□ -0.24
TMPRSS4-220ENST00000618855 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
TMPRSS4-220ENST00000618855 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
TMPRSS4-220ENST00000618855 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
TMPRSS4-220ENST00000618855 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
TMPRSS4-220ENST00000618855 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
TMPRSS4-220ENST00000618855 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
TMPRSS4-220ENST00000618855 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
TMPRSS4-220ENST00000618855 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
TMPRSS4-220ENST00000618855 HIRIP3Q9BW71 556 aaPredicted RBP13.5□□□□□ -0.25
TMPRSS4-220ENST00000618855 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
TMPRSS4-220ENST00000618855 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
TMPRSS4-220ENST00000618855 ANP32CO43423 234 aa13.44□□□□□ -0.26
TMPRSS4-220ENST00000618855 CLIP1P30622 1438 aa13.43□□□□□ -0.26
TMPRSS4-220ENST00000618855 POLR3GLQ9BT43 218 aa13.39□□□□□ -0.27
TMPRSS4-220ENST00000618855 GOLGA3Q08378 1498 aa13.38□□□□□ -0.27
TMPRSS4-220ENST00000618855 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
TMPRSS4-220ENST00000618855 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
TMPRSS4-220ENST00000618855 NBR1Q14596 966 aa13.37□□□□□ -0.27
TMPRSS4-220ENST00000618855 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
TMPRSS4-220ENST00000618855 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
TMPRSS4-220ENST00000618855 MSH5O43196 834 aa13.34□□□□□ -0.27
TMPRSS4-220ENST00000618855 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
TMPRSS4-220ENST00000618855 ZNF777Q9ULD5 760 aaPredicted RBP13.34□□□□□ -0.27
TMPRSS4-220ENST00000618855 MYT1LQ9UL68 1186 aa13.34□□□□□ -0.27
TMPRSS4-220ENST00000618855 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
TMPRSS4-220ENST00000618855 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
TMPRSS4-220ENST00000618855 EEA1Q15075 1411 aa13.3□□□□□ -0.28
TMPRSS4-220ENST00000618855 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
TMPRSS4-220ENST00000618855 SIN3AQ96ST3 1273 aa13.29□□□□□ -0.28
TMPRSS4-220ENST00000618855 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
TMPRSS4-220ENST00000618855 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms