Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.33□□□□□ -0.44
P04436 SDCBP2P1-201ENST00000416115 614 ntBASIC12.33□□□□□ -0.44
P04436 NRADDP-201ENST00000437305 691 ntBASIC12.33□□□□□ -0.44
P04436 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
P04436 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.33□□□□□ -0.44
P04436 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.33□□□□□ -0.44
P04436 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.33□□□□□ -0.44
P04436 RN7SL605P-201ENST00000577229 281 ntBASIC12.33□□□□□ -0.44
P04436 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.33□□□□□ -0.44
P04436 PEBP1P2-201ENST00000603980 558 ntBASIC12.33□□□□□ -0.44
P04436 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC12.33□□□□□ -0.44
P04436 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.33□□□□□ -0.44
P04436 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
P04436 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.33□□□□□ -0.44
P04436 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
P04436 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04436 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
P04436 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.32□□□□□ -0.44
P04436 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
P04436 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.32□□□□□ -0.44
P04436 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
P04436 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 AC012531.1-201ENST00000562848 2680 ntBASIC12.32□□□□□ -0.44
P04436 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
P04436 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
P04436 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.32□□□□□ -0.44
P04436 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.32□□□□□ -0.44
P04436 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.32□□□□□ -0.44
P04436 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.32□□□□□ -0.44
P04436 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.32□□□□□ -0.44
P04436 ALG1L7P-201ENST00000502317 768 ntBASIC12.32□□□□□ -0.44
P04436 NDUFB2P1-201ENST00000506966 295 ntBASIC12.32□□□□□ -0.44
P04436 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.32□□□□□ -0.44
P04436 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC12.32□□□□□ -0.44
P04436 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 RN7SL162P-201ENST00000579233 292 ntBASIC12.32□□□□□ -0.44
P04436 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
P04436 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC12.32□□□□□ -0.44
P04436 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC12.32□□□□□ -0.44
P04436 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.32□□□□□ -0.44
P04436 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.32□□□□□ -0.44
P04436 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P04436 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 AC090114.2-201ENST00000608477 7054 ntBASIC12.32□□□□□ -0.44
P04436 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04436 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 AC004623.1-201ENST00000624592 2127 ntBASIC12.32□□□□□ -0.44
P04436 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P04436 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.32□□□□□ -0.44
P04436 MIR497HG-202ENST00000572453 3838 ntBASIC12.32□□□□□ -0.44
P04436 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P04436 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.32□□□□□ -0.44
P04436 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P04436 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04436 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms