Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC007598.3-201ENST00000623077 1678 ntBASIC11.36□□□□□ -0.59
CD74P04233 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
CD74P04233 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC11.36□□□□□ -0.59
CD74P04233 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 NME4-203ENST00000397722 1232 ntTSL 2 BASIC11.36□□□□□ -0.59
CD74P04233 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.36□□□□□ -0.59
CD74P04233 HNRNPA1P33-201ENST00000421426 561 ntBASIC11.36□□□□□ -0.59
CD74P04233 EEF1DP2-201ENST00000433698 843 ntBASIC11.36□□□□□ -0.59
CD74P04233 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.36□□□□□ -0.59
CD74P04233 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.36□□□□□ -0.59
CD74P04233 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.36□□□□□ -0.59
CD74P04233 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11.36□□□□□ -0.59
CD74P04233 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.36□□□□□ -0.59
CD74P04233 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.36□□□□□ -0.59
CD74P04233 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.36□□□□□ -0.59
CD74P04233 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 AC008687.7-202ENST00000637404 953 ntBASIC11.36□□□□□ -0.59
CD74P04233 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.36□□□□□ -0.59
CD74P04233 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.36□□□□□ -0.59
CD74P04233 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CD74P04233 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CD74P04233 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC11.36□□□□□ -0.59
CD74P04233 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
CD74P04233 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC11.35□□□□□ -0.59
CD74P04233 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 NTM-206ENST00000427481 2583 ntTSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
CD74P04233 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
CD74P04233 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.35□□□□□ -0.59
CD74P04233 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CD74P04233 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CD74P04233 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC11.35□□□□□ -0.59
CD74P04233 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 TMEM14DP-201ENST00000422205 345 ntBASIC11.35□□□□□ -0.59
CD74P04233 RPL7P3-201ENST00000441388 714 ntBASIC11.35□□□□□ -0.59
CD74P04233 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.35□□□□□ -0.59
CD74P04233 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.35□□□□□ -0.59
CD74P04233 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CD74P04233 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC11.35□□□□□ -0.59
CD74P04233 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.35□□□□□ -0.59
CD74P04233 IQSEC3P1-201ENST00000538799 536 ntBASIC11.35□□□□□ -0.59
CD74P04233 AC079316.1-201ENST00000548397 411 ntBASIC11.35□□□□□ -0.59
CD74P04233 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms