Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 NAA38-204ENST00000575208 529 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 AL118522.1-201ENST00000611368 560 ntBASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 Z82244.1-201ENST00000631502 840 ntBASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LYSMD3Q7Z3D4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 RN7SL818P-201ENST00000485099 259 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 RN7SL725P-201ENST00000606439 259 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AP001065.2-201ENST00000617205 644 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC026120.2-201ENST00000617239 309 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC105137.3-201ENST00000617588 984 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AL034417.3-201ENST00000641100 1043 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC106818.1-201ENST00000623223 3242 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC138969.2-201ENST00000532739 9932 ntBASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD3Q7Z3D4 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms