Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.84□□□□□ -0.35
CLK1P49759 POU5F1P2-201ENST00000521750 823 ntBASIC12.84□□□□□ -0.35
CLK1P49759 AC090857.1-201ENST00000527400 390 ntBASIC12.84□□□□□ -0.35
CLK1P49759 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.84□□□□□ -0.35
CLK1P49759 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.84□□□□□ -0.35
CLK1P49759 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.84□□□□□ -0.35
CLK1P49759 NDUFV2P1-201ENST00000596415 907 ntBASIC12.84□□□□□ -0.35
CLK1P49759 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.84□□□□□ -0.35
CLK1P49759 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.84□□□□□ -0.35
CLK1P49759 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLK1P49759 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLK1P49759 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CLK1P49759 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 AC108024.1-201ENST00000626286 1721 ntBASIC12.84□□□□□ -0.35
CLK1P49759 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.84□□□□□ -0.35
CLK1P49759 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.84□□□□□ -0.35
CLK1P49759 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CLK1P49759 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLK1P49759 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLK1P49759 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
CLK1P49759 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.83□□□□□ -0.35
CLK1P49759 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
CLK1P49759 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CLK1P49759 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CLK1P49759 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CLK1P49759 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CLK1P49759 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CLK1P49759 AC006335.1-201ENST00000445200 547 ntBASIC12.83□□□□□ -0.36
CLK1P49759 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 ZNF767P-206ENST00000513792 565 ntBASIC12.83□□□□□ -0.36
CLK1P49759 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 KRT8P1-201ENST00000557533 1207 ntBASIC12.83□□□□□ -0.36
CLK1P49759 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.83□□□□□ -0.36
CLK1P49759 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 FRMPD2B-201ENST00000431305 1347 ntBASIC12.83□□□□□ -0.36
CLK1P49759 LINC00115-201ENST00000473798 1317 ntBASIC12.83□□□□□ -0.36
CLK1P49759 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.83□□□□□ -0.36
CLK1P49759 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CLK1P49759 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLK1P49759 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.82□□□□□ -0.36
CLK1P49759 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLK1P49759 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.82□□□□□ -0.36
CLK1P49759 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms