Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.38□□□□□ -0.59
CD74P04233 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC11.38□□□□□ -0.59
CD74P04233 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC11.38□□□□□ -0.59
CD74P04233 AL021707.6-201ENST00000609212 491 ntBASIC11.38□□□□□ -0.59
CD74P04233 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.38□□□□□ -0.59
CD74P04233 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.38□□□□□ -0.59
CD74P04233 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC11.38□□□□□ -0.59
CD74P04233 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC11.38□□□□□ -0.59
CD74P04233 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC11.38□□□□□ -0.59
CD74P04233 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
CD74P04233 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.38□□□□□ -0.59
CD74P04233 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.38□□□□□ -0.59
CD74P04233 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC11.38□□□□□ -0.59
CD74P04233 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 AL583810.2-201ENST00000556430 3254 ntBASIC11.38□□□□□ -0.59
CD74P04233 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CD74P04233 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 AIFM1P1-201ENST00000413342 1841 ntBASIC11.37□□□□□ -0.59
CD74P04233 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 AL805961.2-201ENST00000642139 4817 ntBASIC11.37□□□□□ -0.59
CD74P04233 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 GGTLC4P-201ENST00000402176 664 ntBASIC11.37□□□□□ -0.59
CD74P04233 AC236430.1-201ENST00000402231 743 ntBASIC11.37□□□□□ -0.59
CD74P04233 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
CD74P04233 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.37□□□□□ -0.59
CD74P04233 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.37□□□□□ -0.59
CD74P04233 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.37□□□□□ -0.59
CD74P04233 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC11.37□□□□□ -0.59
CD74P04233 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 RN7SL752P-201ENST00000463779 287 ntBASIC11.37□□□□□ -0.59
CD74P04233 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 KRT8P1-201ENST00000557533 1207 ntBASIC11.37□□□□□ -0.59
CD74P04233 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.37□□□□□ -0.59
CD74P04233 NDUFB10P1-201ENST00000567319 521 ntBASIC11.37□□□□□ -0.59
CD74P04233 NAA38-204ENST00000575208 529 ntTSL 3 BASIC11.37□□□□□ -0.59
CD74P04233 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.37□□□□□ -0.59
CD74P04233 MIR3188-201ENST00000583494 85 ntBASIC11.37□□□□□ -0.59
CD74P04233 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CD74P04233 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CD74P04233 AC090502.4-201ENST00000551714 1386 ntBASIC11.37□□□□□ -0.59
CD74P04233 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.37□□□□□ -0.59
CD74P04233 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CD74P04233 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC11.37□□□□□ -0.59
CD74P04233 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CD74P04233 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms