Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ATRXP46100 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
ATRXP46100 BX640514.1-201ENST00000583223 1918 ntBASIC12.18□□□□□ -0.46
ATRXP46100 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 IGHJ1P-201ENST00000450690 55 ntBASIC12.18□□□□□ -0.46
ATRXP46100 GAPDHP76-201ENST00000512278 976 ntBASIC12.18□□□□□ -0.46
ATRXP46100 ST3GAL1P1-201ENST00000513810 1014 ntBASIC12.18□□□□□ -0.46
ATRXP46100 UBTFL1-201ENST00000530464 1182 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ATRXP46100 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.18□□□□□ -0.46
ATRXP46100 MIR4526-201ENST00000583168 87 ntBASIC12.18□□□□□ -0.46
ATRXP46100 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC12.18□□□□□ -0.46
ATRXP46100 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC12.18□□□□□ -0.46
ATRXP46100 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC12.18□□□□□ -0.46
ATRXP46100 DANCR-205ENST00000623036 748 ntTSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 AC010601.2-201ENST00000623060 774 ntBASIC12.18□□□□□ -0.46
ATRXP46100 AL669831.6-201ENST00000635557 837 ntBASIC12.18□□□□□ -0.46
ATRXP46100 AL031430.1-201ENST00000642067 1039 ntBASIC12.18□□□□□ -0.46
ATRXP46100 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 GSTM2P1-201ENST00000405166 654 ntBASIC12.18□□□□□ -0.46
ATRXP46100 AL133517.1-201ENST00000413412 748 ntBASIC12.18□□□□□ -0.46
ATRXP46100 AC005822.1-201ENST00000414124 1034 ntBASIC12.18□□□□□ -0.46
ATRXP46100 EHF-209ENST00000531728 485 ntTSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 PSME1-210ENST00000561435 945 ntTSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 AP001120.3-201ENST00000585729 489 ntBASIC12.18□□□□□ -0.46
ATRXP46100 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC12.18□□□□□ -0.46
ATRXP46100 AL139424.3-202ENST00000641619 917 ntBASIC12.18□□□□□ -0.46
ATRXP46100 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.18□□□□□ -0.46
ATRXP46100 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ATRXP46100 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ATRXP46100 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 AL157832.2-205ENST00000597245 1649 ntBASIC12.17□□□□□ -0.46
ATRXP46100 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 USP17L6P-201ENST00000382470 1197 ntBASIC12.17□□□□□ -0.46
ATRXP46100 SNORA9B-201ENST00000384170 133 ntBASIC12.17□□□□□ -0.46
ATRXP46100 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC12.17□□□□□ -0.46
ATRXP46100 PGAM1P2-201ENST00000436071 725 ntBASIC12.17□□□□□ -0.46
ATRXP46100 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.17□□□□□ -0.46
ATRXP46100 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC12.17□□□□□ -0.46
ATRXP46100 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC12.17□□□□□ -0.46
ATRXP46100 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC12.17□□□□□ -0.46
ATRXP46100 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC12.17□□□□□ -0.46
ATRXP46100 HP-215ENST00000569639 568 ntTSL 4 BASIC12.17□□□□□ -0.46
ATRXP46100 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC12.17□□□□□ -0.46
ATRXP46100 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC12.17□□□□□ -0.46
ATRXP46100 AL356423.1-201ENST00000604953 538 ntBASIC12.17□□□□□ -0.46
ATRXP46100 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC12.17□□□□□ -0.46
ATRXP46100 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC12.17□□□□□ -0.46
ATRXP46100 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
ATRXP46100 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
ATRXP46100 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ATRXP46100 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms