Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 LINC02228-202ENST00000641261 2489 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 FAM21EP-201ENST00000417804 985 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 AC069218.1-201ENST00000435269 762 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 RPL7P35-201ENST00000446943 740 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 LYPLA2P1-203ENST00000447689 696 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 GNG10P1-201ENST00000452289 199 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 U62317.3-201ENST00000608319 855 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 AL118522.1-201ENST00000611368 560 ntBASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NPIPB9F8W1W9 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 Z98259.1-201ENST00000564261 1697 ntBASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 LINC00563-201ENST00000566370 1400 ntBASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 PSAT1P2-201ENST00000426107 972 ntBASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 AC018635.2-201ENST00000608625 364 ntBASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 MFSD12-215ENST00000615613 688 ntBASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NPIPB9F8W1W9 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms