Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.41□□□□□ -0.26
NCDNQ9UBB6 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.41□□□□□ -0.26
NCDNQ9UBB6 AC069061.4-201ENST00000581294 1347 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AC015813.5-201ENST00000624641 1514 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 OR52X1P-201ENST00000446117 914 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 RPL3P9-201ENST00000463217 1183 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AC098591.1-202ENST00000507914 937 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 IGHV1OR16-3-201ENST00000568138 205 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AC006273.1-201ENST00000606966 861 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 BX510359.7-201ENST00000619819 630 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 DUX4L33-201ENST00000635217 958 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 KRT8P42-201ENST00000405771 1399 ntBASIC13.4□□□□□ -0.26
NCDNQ9UBB6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC13.4□□□□□ -0.26
NCDNQ9UBB6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NCDNQ9UBB6 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.4□□□□□ -0.27
NCDNQ9UBB6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 AL359881.3-201ENST00000602640 1721 ntBASIC13.39□□□□□ -0.27
NCDNQ9UBB6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 SERPINB8P1-201ENST00000401898 377 ntBASIC13.39□□□□□ -0.27
NCDNQ9UBB6 Z84721.1-201ENST00000438841 372 ntBASIC13.39□□□□□ -0.27
NCDNQ9UBB6 AC012066.1-201ENST00000439252 694 ntBASIC13.39□□□□□ -0.27
NCDNQ9UBB6 PLAC9P1-203ENST00000440031 223 ntBASIC13.39□□□□□ -0.27
NCDNQ9UBB6 AL137077.1-201ENST00000442115 528 ntBASIC13.39□□□□□ -0.27
NCDNQ9UBB6 CHCHD2P6-201ENST00000454346 447 ntBASIC13.39□□□□□ -0.27
NCDNQ9UBB6 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC13.39□□□□□ -0.27
NCDNQ9UBB6 RN7SL47P-201ENST00000488710 299 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms