Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CICP1-201ENST00000416803 2410 ntBASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD3Q7Z3D4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 SEC63P1-201ENST00000425785 1258 ntBASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 MIR6858-201ENST00000620733 67 ntBASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 AP000437.1-201ENST00000624057 2085 ntBASIC13.67□□□□□ -0.22
LYSMD3Q7Z3D4 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 ACTG1P19-201ENST00000418987 1116 ntBASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 KRT8P42-201ENST00000405771 1399 ntBASIC13.66□□□□□ -0.22
LYSMD3Q7Z3D4 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms