Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM2P07951 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TPM2P07951 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TPM2P07951 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM2P07951 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TPM2P07951 AC021723.1-201ENST00000486306 515 ntBASIC15.52■□□□□ 0.08
TPM2P07951 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM2P07951 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM2P07951 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TPM2P07951 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM2P07951 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.52■□□□□ 0.08
TPM2P07951 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.52■□□□□ 0.08
TPM2P07951 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC15.52■□□□□ 0.07
TPM2P07951 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TPM2P07951 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC15.52■□□□□ 0.07
TPM2P07951 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPM2P07951 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPM2P07951 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TPM2P07951 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TPM2P07951 AC080013.1-204ENST00000607426 2185 ntBASIC15.52■□□□□ 0.07
TPM2P07951 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TPM2P07951 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC15.52■□□□□ 0.07
TPM2P07951 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 AC018645.3-201ENST00000628855 2646 ntBASIC15.51■□□□□ 0.07
TPM2P07951 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TPM2P07951 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TPM2P07951 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM2P07951 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM2P07951 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM2P07951 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.51■□□□□ 0.07
TPM2P07951 MIR4783-201ENST00000580343 82 ntBASIC15.51■□□□□ 0.07
TPM2P07951 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.51■□□□□ 0.07
TPM2P07951 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 KCTD21-AS1-207ENST00000600795 1549 ntBASIC15.51■□□□□ 0.07
TPM2P07951 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.51■□□□□ 0.07
TPM2P07951 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC15.51■□□□□ 0.07
TPM2P07951 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.51■□□□□ 0.07
TPM2P07951 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC15.51■□□□□ 0.07
TPM2P07951 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TPM2P07951 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 AP002353.1-201ENST00000528257 1599 ntBASIC15.5■□□□□ 0.07
TPM2P07951 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 AC020917.4-201ENST00000623994 1999 ntBASIC15.5■□□□□ 0.07
TPM2P07951 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.5■□□□□ 0.07
TPM2P07951 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 SNORA50C-201ENST00000408535 133 ntBASIC15.5■□□□□ 0.07
TPM2P07951 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TPM2P07951 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 YBX1P6-201ENST00000442962 1002 ntBASIC15.5■□□□□ 0.07
TPM2P07951 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.5■□□□□ 0.07
TPM2P07951 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.5■□□□□ 0.07
TPM2P07951 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.5■□□□□ 0.07
TPM2P07951 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.5■□□□□ 0.07
TPM2P07951 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 SNORA50.1-201ENST00000628590 135 ntBASIC15.5■□□□□ 0.07
TPM2P07951 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TPM2P07951 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC15.5■□□□□ 0.07
TPM2P07951 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms