RNA–Protein interactions for RNA: ENST00000542611.5

NBR1-202, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2 BASIC

Gene NBR1, Length 2,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-202ENST00000542611 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
NBR1-202ENST00000542611 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
NBR1-202ENST00000542611 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
NBR1-202ENST00000542611 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
NBR1-202ENST00000542611 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
NBR1-202ENST00000542611 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
NBR1-202ENST00000542611 ABCC9O60706 1549 aa20.94■□□□□ 0.94
NBR1-202ENST00000542611 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
NBR1-202ENST00000542611 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
NBR1-202ENST00000542611 NACADO15069 1562 aa20.6■□□□□ 0.89
NBR1-202ENST00000542611 SUPT5HO00267 1087 aaKnown RBP20.57■□□□□ 0.88
NBR1-202ENST00000542611 PELP1Q8IZL8 1130 aaKnown RBP20.55■□□□□ 0.88
NBR1-202ENST00000542611 RB1CC1Q8TDY2 1594 aa20.4■□□□□ 0.86
NBR1-202ENST00000542611 HRCP23327 699 aa20.39■□□□□ 0.85
NBR1-202ENST00000542611 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
NBR1-202ENST00000542611 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
NBR1-202ENST00000542611 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
NBR1-202ENST00000542611 MYT1Q01538 1121 aa19.94■□□□□ 0.78
NBR1-202ENST00000542611 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
NBR1-202ENST00000542611 PPARGC1BQ86YN6 1023 aaKnown RBP19.87■□□□□ 0.77
NBR1-202ENST00000542611 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
NBR1-202ENST00000542611 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
NBR1-202ENST00000542611 WIZO95785 1651 aa19.77■□□□□ 0.76
NBR1-202ENST00000542611 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
NBR1-202ENST00000542611 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
NBR1-202ENST00000542611 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
NBR1-202ENST00000542611 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
NBR1-202ENST00000542611 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
NBR1-202ENST00000542611 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
NBR1-202ENST00000542611 PEG3Q9GZU2 1588 aa19.36■□□□□ 0.69
NBR1-202ENST00000542611 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
NBR1-202ENST00000542611 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
NBR1-202ENST00000542611 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
NBR1-202ENST00000542611 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
NBR1-202ENST00000542611 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
NBR1-202ENST00000542611 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
NBR1-202ENST00000542611 ABCC8Q09428 1581 aa19.09■□□□□ 0.65
NBR1-202ENST00000542611 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
NBR1-202ENST00000542611 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
NBR1-202ENST00000542611 NCAPD3P42695 1498 aa19.02■□□□□ 0.64
NBR1-202ENST00000542611 FAM9AQ8IZU1 332 aaPredicted RBP19.02■□□□□ 0.63
NBR1-202ENST00000542611 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
NBR1-202ENST00000542611 ACIN1Q9UKV3 1341 aaKnown RBP18.94■□□□□ 0.62
NBR1-202ENST00000542611 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
NBR1-202ENST00000542611 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
NBR1-202ENST00000542611 TRIM26Q12899 539 aaPredicted RBP18.89■□□□□ 0.61
NBR1-202ENST00000542611 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
NBR1-202ENST00000542611 NEUROD1Q13562 356 aa18.83■□□□□ 0.61
NBR1-202ENST00000542611 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.6
NBR1-202ENST00000542611 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
NBR1-202ENST00000542611 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
NBR1-202ENST00000542611 SOGA1O94964 1423 aa18.74■□□□□ 0.59
NBR1-202ENST00000542611 CFTRP13569 1480 aa18.7■□□□□ 0.58
NBR1-202ENST00000542611 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
NBR1-202ENST00000542611 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
NBR1-202ENST00000542611 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
NBR1-202ENST00000542611 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
NBR1-202ENST00000542611 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
NBR1-202ENST00000542611 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
NBR1-202ENST00000542611 EEA1Q15075 1411 aa18.58■□□□□ 0.56
NBR1-202ENST00000542611 CUX1P39880 1505 aa18.57■□□□□ 0.56
NBR1-202ENST00000542611 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
NBR1-202ENST00000542611 BCL11AQ9H165 835 aa18.52■□□□□ 0.56
NBR1-202ENST00000542611 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
NBR1-202ENST00000542611 NESP48681 1621 aa18.48■□□□□ 0.55
NBR1-202ENST00000542611 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
NBR1-202ENST00000542611 GOLGA3Q08378 1498 aa18.42■□□□□ 0.54
NBR1-202ENST00000542611 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
NBR1-202ENST00000542611 KIF21BO75037 1637 aa18.4■□□□□ 0.54
NBR1-202ENST00000542611 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
NBR1-202ENST00000542611 CEP162Q5TB80 1403 aa18.38■□□□□ 0.53
NBR1-202ENST00000542611 TNIKQ9UKE5 1360 aa18.38■□□□□ 0.53
NBR1-202ENST00000542611 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
NBR1-202ENST00000542611 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
NBR1-202ENST00000542611 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
NBR1-202ENST00000542611 KIF27Q86VH2 1401 aa18.3■□□□□ 0.52
NBR1-202ENST00000542611 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
NBR1-202ENST00000542611 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.52
NBR1-202ENST00000542611 CUX2O14529 1486 aa18.26■□□□□ 0.51
NBR1-202ENST00000542611 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
NBR1-202ENST00000542611 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
NBR1-202ENST00000542611 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
NBR1-202ENST00000542611 PRKCSHP14314 528 aaPredicted RBP18.22■□□□□ 0.51
NBR1-202ENST00000542611 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
NBR1-202ENST00000542611 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
NBR1-202ENST00000542611 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
NBR1-202ENST00000542611 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
NBR1-202ENST00000542611 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
NBR1-202ENST00000542611 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
NBR1-202ENST00000542611 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
NBR1-202ENST00000542611 CLIP1P30622 1438 aa18.16■□□□□ 0.5
NBR1-202ENST00000542611 IGF1RP08069 1367 aa18.13■□□□□ 0.49
NBR1-202ENST00000542611 ABCA10Q8WWZ4 1543 aa18.11■□□□□ 0.49
NBR1-202ENST00000542611 WDR97A6NE52 1622 aa18.07■□□□□ 0.48
NBR1-202ENST00000542611 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
NBR1-202ENST00000542611 VPS8Q8N3P4 1428 aa18.02■□□□□ 0.47
NBR1-202ENST00000542611 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
NBR1-202ENST00000542611 TDRD9Q8NDG6 1382 aaKnown RBP17.98■□□□□ 0.47
NBR1-202ENST00000542611 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
NBR1-202ENST00000542611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms