Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 AL162615.1-201ENST00000429893 1653 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 BX679664.3-201ENST00000414070 555 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 RPL7P3-201ENST00000441388 714 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 AC113935.1-201ENST00000471722 555 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 SRP19-206ENST00000515463 660 ntTSL 3 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 RAB43P1-201ENST00000561790 589 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 AP006547.1-201ENST00000563435 692 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 AP000346.4-201ENST00000614827 381 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 RHOXF1P1-202ENST00000635473 501 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 ERG-211ENST00000453032 1595 ntTSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
RAB40CQ96S21 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 AC007336.3-201ENST00000623886 2160 ntBASIC11.06□□□□□ -0.64
RAB40CQ96S21 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RAB40CQ96S21 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC009549.1-201ENST00000603468 1686 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC079178.1-201ENST00000420915 656 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 KLF2P4-201ENST00000451959 1225 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AP000812.2-201ENST00000538934 718 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC010503.4-201ENST00000615487 688 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 AC079336.7-201ENST00000623428 1078 ntBASIC11.05□□□□□ -0.64
RAB40CQ96S21 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC11.05□□□□□ -0.64
RAB40CQ96S21 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RAB40CQ96S21 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms