Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 ACTG1P19-201ENST00000418987 1116 ntBASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 GCSHP3-201ENST00000431120 391 ntBASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC13.75□□□□□ -0.21
SHROOM3Q8TF72 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 TBC1D3P1-201ENST00000590047 1693 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 Z69890.1-201ENST00000382990 339 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AL357373.1-201ENST00000394974 322 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 CES1P2-201ENST00000566467 1242 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AL356585.2-201ENST00000625078 2396 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 OR7E115P-201ENST00000382617 1024 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 FAM21EP-201ENST00000417804 985 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AC004522.1-201ENST00000419978 654 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AP000244.1-201ENST00000424582 201 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AQP7P5-201ENST00000428759 1049 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AQP7P4-201ENST00000447083 1042 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AQP7P2-201ENST00000453967 1041 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AC084752.1-201ENST00000509766 622 ntBASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SHROOM3Q8TF72 AL139339.2-201ENST00000608063 657 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms