Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 AC245140.2-201ENST00000624054 1939 ntBASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 RPL29P2-202ENST00000498671 657 ntBASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 AC112250.1-201ENST00000504640 745 ntBASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
SHKBP1Q8TBC3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AC027139.1-201ENST00000565286 951 ntBASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AC137723.2-201ENST00000623540 398 ntBASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.22□□□□□ -0.13
SHKBP1Q8TBC3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms