Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCDC50Q8IVM0 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 AC022400.8-201ENST00000623453 3599 ntBASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 AC239868.1-201ENST00000369385 493 ntBASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 MIR3940-201ENST00000579148 102 ntBASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 AL157791.1-201ENST00000553667 1699 ntBASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC50Q8IVM0 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 AC004898.1-201ENST00000451057 766 ntBASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 AL133467.4-201ENST00000602953 725 ntBASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 POM121L4P-202ENST00000427789 1891 ntBASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC50Q8IVM0 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 AC027369.3-201ENST00000530465 3707 ntBASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 KRT8P18-201ENST00000413425 1445 ntBASIC14.42□□□□□ -0.1
CCDC50Q8IVM0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms