Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 IFIT3-201ENST00000371811 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 CHRNB3-201ENST00000289957 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 AP006222.1-203ENST00000441866 2256 ntTSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 NRG1-203ENST00000405005 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 API5-208ENST00000531273 1868 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 AC008040.5-201ENST00000599781 1781 ntBASIC8.54□□□□□ -1.04
PCP4P48539 MUC20P1-201ENST00000457750 1680 ntBASIC8.54□□□□□ -1.04
PCP4P48539 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 CD300LF-203ENST00000343125 1554 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 TOP3BP1-201ENST00000420768 1380 ntBASIC8.54□□□□□ -1.04
PCP4P48539 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 PGGT1BP1-201ENST00000455321 1023 ntBASIC8.54□□□□□ -1.04
PCP4P48539 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 ITFG2-AS1-204ENST00000547834 411 ntTSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 RPS15-207ENST00000591032 550 ntTSL 3 BASIC8.54□□□□□ -1.04
PCP4P48539 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC8.54□□□□□ -1.04
PCP4P48539 RPS15-212ENST00000593052 629 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 CFAP97-202ENST00000458385 4852 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 DLG2-208ENST00000404783 1831 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC8.54□□□□□ -1.04
PCP4P48539 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PCP4P48539 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 MANEA-AS1-201ENST00000564541 2268 ntBASIC8.54□□□□□ -1.04
PCP4P48539 REM2-202ENST00000536884 1331 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC8.54□□□□□ -1.04
PCP4P48539 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 ZNF835-201ENST00000537055 3450 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PCP4P48539 TBRG1-203ENST00000441174 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
PCP4P48539 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 RHOH-201ENST00000381799 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 KIF3B-201ENST00000375712 6103 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 THRB-AS1-201ENST00000432368 1216 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 CLTA-210ENST00000540080 989 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC8.53□□□□□ -1.04
PCP4P48539 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.53□□□□□ -1.04
PCP4P48539 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC8.53□□□□□ -1.04
PCP4P48539 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
PCP4P48539 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC8.53□□□□□ -1.04
PCP4P48539 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC8.53□□□□□ -1.04
PCP4P48539 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC8.53□□□□□ -1.04
PCP4P48539 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PCP4P48539 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms