RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
CCDC36-201ENST00000296449 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
CCDC36-201ENST00000296449 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
CCDC36-201ENST00000296449 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
CCDC36-201ENST00000296449 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
CCDC36-201ENST00000296449 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
CCDC36-201ENST00000296449 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
CCDC36-201ENST00000296449 HRCP23327 699 aa17.02■□□□□ 0.32
CCDC36-201ENST00000296449 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
CCDC36-201ENST00000296449 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
CCDC36-201ENST00000296449 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
CCDC36-201ENST00000296449 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
CCDC36-201ENST00000296449 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
CCDC36-201ENST00000296449 TRIM26Q12899 539 aaPredicted RBP16.42■□□□□ 0.22
CCDC36-201ENST00000296449 ABCC9O60706 1549 aa16.39■□□□□ 0.21
CCDC36-201ENST00000296449 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
CCDC36-201ENST00000296449 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
CCDC36-201ENST00000296449 SCRIBQ14160 1630 aa16.17■□□□□ 0.18
CCDC36-201ENST00000296449 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
CCDC36-201ENST00000296449 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
CCDC36-201ENST00000296449 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
CCDC36-201ENST00000296449 PELP1Q8IZL8 1130 aaKnown RBP15.92■□□□□ 0.14
CCDC36-201ENST00000296449 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
CCDC36-201ENST00000296449 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
CCDC36-201ENST00000296449 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
CCDC36-201ENST00000296449 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
CCDC36-201ENST00000296449 NACADO15069 1562 aa15.83■□□□□ 0.12
CCDC36-201ENST00000296449 WIZO95785 1651 aa15.8■□□□□ 0.12
CCDC36-201ENST00000296449 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
CCDC36-201ENST00000296449 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
CCDC36-201ENST00000296449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
CCDC36-201ENST00000296449 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
CCDC36-201ENST00000296449 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
CCDC36-201ENST00000296449 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
CCDC36-201ENST00000296449 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
CCDC36-201ENST00000296449 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
CCDC36-201ENST00000296449 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
CCDC36-201ENST00000296449 TOP2AP11388 1531 aaKnown RBP15.55■□□□□ 0.08
CCDC36-201ENST00000296449 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
CCDC36-201ENST00000296449 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
CCDC36-201ENST00000296449 TTBK1Q5TCY1 1321 aaPredicted RBP15.48■□□□□ 0.07
CCDC36-201ENST00000296449 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
CCDC36-201ENST00000296449 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
CCDC36-201ENST00000296449 SOGA1O94964 1423 aa15.48■□□□□ 0.07
CCDC36-201ENST00000296449 SMARCA4P51532 1647 aa15.47■□□□□ 0.07
CCDC36-201ENST00000296449 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.06
CCDC36-201ENST00000296449 EEA1Q15075 1411 aa15.45■□□□□ 0.06
CCDC36-201ENST00000296449 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
CCDC36-201ENST00000296449 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
CCDC36-201ENST00000296449 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
CCDC36-201ENST00000296449 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
CCDC36-201ENST00000296449 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
CCDC36-201ENST00000296449 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
CCDC36-201ENST00000296449 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
CCDC36-201ENST00000296449 MYT1Q01538 1121 aa15.24■□□□□ 0.03
CCDC36-201ENST00000296449 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
CCDC36-201ENST00000296449 KIF21BO75037 1637 aa15.22■□□□□ 0.03
CCDC36-201ENST00000296449 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
CCDC36-201ENST00000296449 YTHDC1Q96MU7 727 aaKnown RBP15.19■□□□□ 0.02
CCDC36-201ENST00000296449 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
CCDC36-201ENST00000296449 CLIP1P30622 1438 aa15.18■□□□□ 0.02
CCDC36-201ENST00000296449 MIER1Q8N108 512 aa15.18■□□□□ 0.02
CCDC36-201ENST00000296449 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
CCDC36-201ENST00000296449 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
CCDC36-201ENST00000296449 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
CCDC36-201ENST00000296449 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
CCDC36-201ENST00000296449 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCDC36-201ENST00000296449 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
CCDC36-201ENST00000296449 APLP2Q06481 763 aa15.06■□□□□ 0
CCDC36-201ENST00000296449 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
CCDC36-201ENST00000296449 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
CCDC36-201ENST00000296449 RANGAP1P46060 587 aaPredicted RBP14.98□□□□□ -0.01
CCDC36-201ENST00000296449 TOP2BQ02880 1626 aa14.96□□□□□ -0.01
CCDC36-201ENST00000296449 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.02
CCDC36-201ENST00000296449 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
CCDC36-201ENST00000296449 ARAP1Q96P48 1450 aa14.91□□□□□ -0.02
CCDC36-201ENST00000296449 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
CCDC36-201ENST00000296449 PRXQ9BXM0 1461 aa14.9□□□□□ -0.02
CCDC36-201ENST00000296449 KANK4Q5T7N3 995 aaPredicted RBP14.88□□□□□ -0.03
CCDC36-201ENST00000296449 RRBP1Q9P2E9 1410 aaKnown RBP14.85□□□□□ -0.03
CCDC36-201ENST00000296449 CUX2O14529 1486 aa14.83□□□□□ -0.04
CCDC36-201ENST00000296449 SUPT16HQ9Y5B9 1047 aaKnown RBP14.81□□□□□ -0.04
CCDC36-201ENST00000296449 CCNB3Q8WWL7 1395 aa14.76□□□□□ -0.05
CCDC36-201ENST00000296449 CUX1P39880 1505 aa14.76□□□□□ -0.05
CCDC36-201ENST00000296449 KIF27Q86VH2 1401 aa14.75□□□□□ -0.05
CCDC36-201ENST00000296449 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
CCDC36-201ENST00000296449 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
CCDC36-201ENST00000296449 ITGAEP38570 1179 aa14.68□□□□□ -0.06
CCDC36-201ENST00000296449 RAB3GAP2Q9H2M9 1393 aa14.67□□□□□ -0.06
CCDC36-201ENST00000296449 MAPKBP1O60336 1514 aa14.67□□□□□ -0.06
CCDC36-201ENST00000296449 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
CCDC36-201ENST00000296449 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
CCDC36-201ENST00000296449 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
CCDC36-201ENST00000296449 KCNH8Q96L42 1107 aa14.64□□□□□ -0.07
CCDC36-201ENST00000296449 TSHZ2Q9NRE2 1034 aa14.64□□□□□ -0.07
CCDC36-201ENST00000296449 CFTRP13569 1480 aa14.63□□□□□ -0.07
CCDC36-201ENST00000296449 TIAM1Q13009 1591 aa14.62□□□□□ -0.07
CCDC36-201ENST00000296449 SETD5Q9C0A6 1442 aa14.6□□□□□ -0.07
CCDC36-201ENST00000296449 IGF1RP08069 1367 aa14.58□□□□□ -0.08
CCDC36-201ENST00000296449 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms