Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TPM2P07951 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM2P07951 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM2P07951 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM2P07951 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.56■□□□□ 0.08
TPM2P07951 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM2P07951 KLF2P1-201ENST00000447438 1042 ntBASIC15.56■□□□□ 0.08
TPM2P07951 AL160314.3-201ENST00000556041 767 ntBASIC15.56■□□□□ 0.08
TPM2P07951 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.56■□□□□ 0.08
TPM2P07951 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.56■□□□□ 0.08
TPM2P07951 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM2P07951 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 AL162426.1-201ENST00000624141 743 ntBASIC15.56■□□□□ 0.08
TPM2P07951 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TPM2P07951 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 FAM95B1-212ENST00000592873 4692 ntBASIC15.56■□□□□ 0.08
TPM2P07951 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 SALL4P6-201ENST00000429385 1691 ntBASIC15.56■□□□□ 0.08
TPM2P07951 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC15.56■□□□□ 0.08
TPM2P07951 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC15.56■□□□□ 0.08
TPM2P07951 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TPM2P07951 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TPM2P07951 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM2P07951 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC15.55■□□□□ 0.08
TPM2P07951 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.55■□□□□ 0.08
TPM2P07951 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM2P07951 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 LINC00115-201ENST00000473798 1317 ntBASIC15.55■□□□□ 0.08
TPM2P07951 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 COX5BP8-201ENST00000416911 349 ntBASIC15.55■□□□□ 0.08
TPM2P07951 AL354877.1-201ENST00000424412 413 ntBASIC15.55■□□□□ 0.08
TPM2P07951 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 AC026954.1-201ENST00000429771 1293 ntBASIC15.55■□□□□ 0.08
TPM2P07951 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.55■□□□□ 0.08
TPM2P07951 LINC02084-201ENST00000606069 1096 ntBASIC15.55■□□□□ 0.08
TPM2P07951 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.55■□□□□ 0.08
TPM2P07951 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC15.55■□□□□ 0.08
TPM2P07951 AC009108.4-201ENST00000623284 2451 ntBASIC15.55■□□□□ 0.08
TPM2P07951 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TPM2P07951 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TPM2P07951 AC092123.2-201ENST00000611189 5421 ntBASIC15.54■□□□□ 0.08
TPM2P07951 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPM2P07951 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TPM2P07951 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM2P07951 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM2P07951 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TPM2P07951 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TPM2P07951 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
TPM2P07951 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.54■□□□□ 0.08
TPM2P07951 AC025183.3-201ENST00000623526 1482 ntBASIC15.54■□□□□ 0.08
TPM2P07951 POM121L7P-201ENST00000329949 2404 ntBASIC15.54■□□□□ 0.08
TPM2P07951 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TPM2P07951 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms