Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB6Q9Y5F9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB6Q9Y5F9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB6Q9Y5F9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB6Q9Y5F9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB6Q9Y5F9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB6Q9Y5F9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB6Q9Y5F9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.86■□□□□ 0.93
PCDHGB6Q9Y5F9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB6Q9Y5F9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
PCDHGB6Q9Y5F9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGB6Q9Y5F9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 AL138724.1-201ENST00000606771 1088 ntBASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 AC004812.2-201ENST00000611079 2094 ntBASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 SYT6-210ENST00000641643 1587 ntBASIC20.85■□□□□ 0.93
PCDHGB6Q9Y5F9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB6Q9Y5F9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB6Q9Y5F9 LINC00565-201ENST00000562710 2331 ntBASIC20.83■□□□□ 0.93
PCDHGB6Q9Y5F9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB6Q9Y5F9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCDHGB6Q9Y5F9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGB6Q9Y5F9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGB6Q9Y5F9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGB6Q9Y5F9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDHGB6Q9Y5F9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 AC241377.3-202ENST00000626088 1088 ntBASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 AC241585.3-202ENST00000628937 1088 ntBASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 AC245100.8-202ENST00000629247 1058 ntBASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 AC009102.2-201ENST00000606772 1639 ntBASIC20.82■□□□□ 0.92
PCDHGB6Q9Y5F9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 AL024507.2-201ENST00000606070 2574 ntBASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGB6Q9Y5F9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 AC011298.3-201ENST00000615796 283 ntBASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB6Q9Y5F9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB6Q9Y5F9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGB6Q9Y5F9 C17orf82-201ENST00000623772 1530 ntBASIC20.79■□□□□ 0.92
PCDHGB6Q9Y5F9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB6Q9Y5F9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB6Q9Y5F9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGB6Q9Y5F9 AL136967.2-201ENST00000623968 743 ntBASIC20.79■□□□□ 0.92
PCDHGB6Q9Y5F9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms