Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
COPS3Q9UNS2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
COPS3Q9UNS2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPS3Q9UNS2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS3Q9UNS2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPS3Q9UNS2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 AC139530.1-201ENST00000575312 1977 ntBASIC19.73■□□□□ 0.75
COPS3Q9UNS2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPS3Q9UNS2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 MIR4508-201ENST00000584178 70 ntBASIC19.72■□□□□ 0.75
COPS3Q9UNS2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 SNX5-217ENST00000606557 1087 ntBASIC19.72■□□□□ 0.75
COPS3Q9UNS2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 AC137767.1-201ENST00000602918 1920 ntBASIC19.72■□□□□ 0.75
COPS3Q9UNS2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
COPS3Q9UNS2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COPS3Q9UNS2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 AC103834.1-201ENST00000520383 144 ntBASIC19.7■□□□□ 0.74
COPS3Q9UNS2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPS3Q9UNS2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms