Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.26■□□□□ 0.67
NUP50Q9UKX7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUP50Q9UKX7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
NUP50Q9UKX7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 AC019069.1-201ENST00000610008 1333 ntBASIC19.23■□□□□ 0.67
NUP50Q9UKX7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUP50Q9UKX7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.22■□□□□ 0.67
NUP50Q9UKX7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NUP50Q9UKX7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 AF106564.1-201ENST00000607058 2553 ntBASIC19.21■□□□□ 0.67
NUP50Q9UKX7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NUP50Q9UKX7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NUP50Q9UKX7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NUP50Q9UKX7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NUP50Q9UKX7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NUP50Q9UKX7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NUP50Q9UKX7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.2■□□□□ 0.66
NUP50Q9UKX7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NUP50Q9UKX7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NUP50Q9UKX7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms