Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNIH4Q9P003 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.73■□□□□ 0.91
CNIH4Q9P003 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CNIH4Q9P003 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH4Q9P003 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH4Q9P003 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CNIH4Q9P003 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH4Q9P003 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.72■□□□□ 0.91
CNIH4Q9P003 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.72■□□□□ 0.91
CNIH4Q9P003 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.72■□□□□ 0.91
CNIH4Q9P003 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CNIH4Q9P003 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH4Q9P003 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH4Q9P003 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH4Q9P003 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH4Q9P003 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.71■□□□□ 0.91
CNIH4Q9P003 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH4Q9P003 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.71■□□□□ 0.91
CNIH4Q9P003 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH4Q9P003 DUX4L19-201ENST00000557448 1267 ntBASIC20.71■□□□□ 0.91
CNIH4Q9P003 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.71■□□□□ 0.91
CNIH4Q9P003 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CNIH4Q9P003 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.71■□□□□ 0.91
CNIH4Q9P003 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH4Q9P003 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNIH4Q9P003 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CNIH4Q9P003 C17orf82-201ENST00000623772 1530 ntBASIC20.7■□□□□ 0.9
CNIH4Q9P003 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH4Q9P003 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH4Q9P003 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.7■□□□□ 0.9
CNIH4Q9P003 AL139246.5-201ENST00000606645 996 ntBASIC20.7■□□□□ 0.9
CNIH4Q9P003 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.7■□□□□ 0.9
CNIH4Q9P003 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNIH4Q9P003 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH4Q9P003 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CNIH4Q9P003 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.7■□□□□ 0.9
CNIH4Q9P003 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNIH4Q9P003 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.7■□□□□ 0.9
CNIH4Q9P003 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CNIH4Q9P003 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CNIH4Q9P003 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 AC241377.3-202ENST00000626088 1088 ntBASIC20.69■□□□□ 0.9
CNIH4Q9P003 AC241585.3-202ENST00000628937 1088 ntBASIC20.69■□□□□ 0.9
CNIH4Q9P003 AC245100.8-202ENST00000629247 1058 ntBASIC20.69■□□□□ 0.9
CNIH4Q9P003 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNIH4Q9P003 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CNIH4Q9P003 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CNIH4Q9P003 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNIH4Q9P003 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CNIH4Q9P003 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CNIH4Q9P003 AC233723.2-201ENST00000623798 2106 ntBASIC20.68■□□□□ 0.9
CNIH4Q9P003 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 C1orf229-201ENST00000623686 2258 ntBASIC20.68■□□□□ 0.9
CNIH4Q9P003 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 AC096631.2-201ENST00000436136 790 ntBASIC20.68■□□□□ 0.9
CNIH4Q9P003 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.68■□□□□ 0.9
CNIH4Q9P003 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.68■□□□□ 0.9
CNIH4Q9P003 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNIH4Q9P003 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.67■□□□□ 0.9
CNIH4Q9P003 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNIH4Q9P003 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.67■□□□□ 0.9
CNIH4Q9P003 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNIH4Q9P003 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.67■□□□□ 0.9
CNIH4Q9P003 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNIH4Q9P003 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNIH4Q9P003 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNIH4Q9P003 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNIH4Q9P003 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNIH4Q9P003 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNIH4Q9P003 AL117328.2-201ENST00000624617 1940 ntBASIC20.66■□□□□ 0.9
CNIH4Q9P003 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CNIH4Q9P003 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.66■□□□□ 0.9
CNIH4Q9P003 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.66■□□□□ 0.9
CNIH4Q9P003 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.66■□□□□ 0.9
CNIH4Q9P003 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNIH4Q9P003 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms