Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 AC091305.1-201ENST00000479476 895 ntBASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 AC027682.1-201ENST00000562846 899 ntBASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 AC079630.1-202ENST00000618127 1840 ntBASIC21.01■□□□□ 0.95
MKKSQ9NPJ1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 AC133637.1-201ENST00000624115 1537 ntBASIC21■□□□□ 0.95
MKKSQ9NPJ1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21■□□□□ 0.95
MKKSQ9NPJ1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
MKKSQ9NPJ1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MKKSQ9NPJ1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21■□□□□ 0.95
MKKSQ9NPJ1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
MKKSQ9NPJ1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 BX842568.3-201ENST00000418104 571 ntBASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 AC008764.7-201ENST00000593779 1081 ntBASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
MKKSQ9NPJ1 RASA4CP-201ENST00000424092 1398 ntBASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 AC233992.3-201ENST00000607491 485 ntBASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MKKSQ9NPJ1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MKKSQ9NPJ1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.95■□□□□ 0.95
MKKSQ9NPJ1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 AC099791.1-201ENST00000416440 715 ntBASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MKKSQ9NPJ1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MKKSQ9NPJ1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.94■□□□□ 0.94
MKKSQ9NPJ1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MKKSQ9NPJ1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MKKSQ9NPJ1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms