Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.9■□□□□ 0.62
GCM1Q9NP62 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 SYT6-210ENST00000641643 1587 ntBASIC18.9■□□□□ 0.62
GCM1Q9NP62 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 AC096631.2-201ENST00000436136 790 ntBASIC18.9■□□□□ 0.62
GCM1Q9NP62 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GCM1Q9NP62 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
GCM1Q9NP62 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.9■□□□□ 0.62
GCM1Q9NP62 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.9■□□□□ 0.62
GCM1Q9NP62 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
GCM1Q9NP62 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GCM1Q9NP62 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
GCM1Q9NP62 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
GCM1Q9NP62 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GCM1Q9NP62 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GCM1Q9NP62 AC006455.2-201ENST00000429931 906 ntBASIC18.89■□□□□ 0.61
GCM1Q9NP62 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.89■□□□□ 0.61
GCM1Q9NP62 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.89■□□□□ 0.61
GCM1Q9NP62 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.89■□□□□ 0.61
GCM1Q9NP62 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.89■□□□□ 0.61
GCM1Q9NP62 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.89■□□□□ 0.61
GCM1Q9NP62 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GCM1Q9NP62 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GCM1Q9NP62 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
GCM1Q9NP62 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GCM1Q9NP62 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GCM1Q9NP62 DUX4L4-201ENST00000566884 1269 ntBASIC18.88■□□□□ 0.61
GCM1Q9NP62 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GCM1Q9NP62 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.88■□□□□ 0.61
GCM1Q9NP62 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
GCM1Q9NP62 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GCM1Q9NP62 AC092068.2-201ENST00000590491 1708 ntBASIC18.88■□□□□ 0.61
GCM1Q9NP62 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GCM1Q9NP62 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GCM1Q9NP62 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.88■□□□□ 0.61
GCM1Q9NP62 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GCM1Q9NP62 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GCM1Q9NP62 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 UNC93B3-201ENST00000308076 687 ntBASIC18.87■□□□□ 0.61
GCM1Q9NP62 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GCM1Q9NP62 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GCM1Q9NP62 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GCM1Q9NP62 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GCM1Q9NP62 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.87■□□□□ 0.61
GCM1Q9NP62 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GCM1Q9NP62 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 AL353803.4-201ENST00000565882 1934 ntBASIC18.86■□□□□ 0.61
GCM1Q9NP62 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
GCM1Q9NP62 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.86■□□□□ 0.61
GCM1Q9NP62 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.86■□□□□ 0.61
GCM1Q9NP62 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.86■□□□□ 0.61
GCM1Q9NP62 AC110285.6-201ENST00000617652 491 ntBASIC18.86■□□□□ 0.61
GCM1Q9NP62 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.86■□□□□ 0.61
GCM1Q9NP62 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GCM1Q9NP62 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
GCM1Q9NP62 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GCM1Q9NP62 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.85■□□□□ 0.61
GCM1Q9NP62 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.85■□□□□ 0.61
GCM1Q9NP62 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.85■□□□□ 0.61
GCM1Q9NP62 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 SERBP1P1-201ENST00000396021 1160 ntBASIC18.85■□□□□ 0.61
GCM1Q9NP62 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.85■□□□□ 0.61
GCM1Q9NP62 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 AL139246.5-201ENST00000606645 996 ntBASIC18.85■□□□□ 0.61
GCM1Q9NP62 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.85■□□□□ 0.61
GCM1Q9NP62 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.85■□□□□ 0.61
GCM1Q9NP62 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GCM1Q9NP62 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GCM1Q9NP62 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GCM1Q9NP62 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GCM1Q9NP62 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms