Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SND1-IT1Q9HBX3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SND1-IT1Q9HBX3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.83□□□□□ -0.03
SND1-IT1Q9HBX3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SND1-IT1Q9HBX3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 RPS2P7-201ENST00000447334 885 ntBASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SND1-IT1Q9HBX3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.82□□□□□ -0.04
SND1-IT1Q9HBX3 AC009831.1-201ENST00000580420 1582 ntBASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 AL022069.1-201ENST00000568025 1636 ntBASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 AL592295.1-201ENST00000400984 884 ntBASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 AC133552.2-201ENST00000619106 1032 ntBASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SND1-IT1Q9HBX3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SND1-IT1Q9HBX3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SND1-IT1Q9HBX3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 SLC25A24-204ENST00000569674 2357 ntBASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.78□□□□□ -0.04
SND1-IT1Q9HBX3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms