Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A1Q9H2H9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A1Q9H2H9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.6■□□□□ 0.89
SLC38A1Q9H2H9 AC009102.2-201ENST00000606772 1639 ntBASIC20.6■□□□□ 0.89
SLC38A1Q9H2H9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC38A1Q9H2H9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC38A1Q9H2H9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 EP400NL-214ENST00000641289 2402 ntBASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.58■□□□□ 0.89
SLC38A1Q9H2H9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC38A1Q9H2H9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC38A1Q9H2H9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC38A1Q9H2H9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 UNC93B8-201ENST00000511903 705 ntBASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC38A1Q9H2H9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 DUX4L4-201ENST00000566884 1269 ntBASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
SLC38A1Q9H2H9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A1Q9H2H9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A1Q9H2H9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC38A1Q9H2H9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC38A1Q9H2H9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 AC127496.7-201ENST00000625110 1798 ntBASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC38A1Q9H2H9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 C17orf82-201ENST00000623772 1530 ntBASIC20.53■□□□□ 0.88
SLC38A1Q9H2H9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 LINC00526-201ENST00000581067 1875 ntBASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 MIR6724-1-201ENST00000616420 92 ntBASIC20.52■□□□□ 0.88
SLC38A1Q9H2H9 MIR6724-2-201ENST00000616483 92 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms