Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SLC7A5P1-201ENST00000568957 537 ntBASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 AC005181.1-201ENST00000604782 1256 ntBASIC21.3■■□□□ 1
CNTNAP3Q9BZ76 AC131274.2-201ENST00000580697 1507 ntBASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 AC092118.2-201ENST00000613495 667 ntBASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.29■■□□□ 1
CNTNAP3Q9BZ76 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 AC142381.4-202ENST00000563973 229 ntBASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 MFSD11-216ENST00000590393 1141 ntBASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP3Q9BZ76 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP3Q9BZ76 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3Q9BZ76 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CNTNAP3Q9BZ76 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.27■■□□□ 1
CNTNAP3Q9BZ76 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3Q9BZ76 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3Q9BZ76 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP3Q9BZ76 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
CNTNAP3Q9BZ76 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP3Q9BZ76 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 KRT18P21-201ENST00000515767 1272 ntBASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 AC231657.2-201ENST00000624556 255 ntBASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP3Q9BZ76 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 DUX4L16-201ENST00000555130 1264 ntBASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 AC073912.3-201ENST00000624414 853 ntBASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP3Q9BZ76 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3Q9BZ76 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNTNAP3Q9BZ76 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.24■□□□□ 0.99
CNTNAP3Q9BZ76 AC211429.1-201ENST00000415277 523 ntBASIC21.24■□□□□ 0.99
CNTNAP3Q9BZ76 AC007322.1-201ENST00000426983 750 ntBASIC21.24■□□□□ 0.99
CNTNAP3Q9BZ76 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3Q9BZ76 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP3Q9BZ76 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 UNC93B4-201ENST00000505679 747 ntBASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CNTNAP3Q9BZ76 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms