Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CDK5RAP1Q96SZ6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 AC126544.1-201ENST00000580842 1059 ntBASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.12■■□□□ 1.29
CDK5RAP1Q96SZ6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDK5RAP1Q96SZ6 ANOS2P-203ENST00000472227 1816 ntBASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.1■■□□□ 1.29
CDK5RAP1Q96SZ6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDK5RAP1Q96SZ6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 ZNRF2P3-201ENST00000424200 374 ntBASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDK5RAP1Q96SZ6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDK5RAP1Q96SZ6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.08■■□□□ 1.28
CDK5RAP1Q96SZ6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDK5RAP1Q96SZ6 AC093323.1-202ENST00000635031 2045 ntBASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 AP005435.1-201ENST00000529293 1178 ntBASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
CDK5RAP1Q96SZ6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDK5RAP1Q96SZ6 AC004687.1-201ENST00000579003 1625 ntBASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 IGHV3-19-201ENST00000521488 291 ntBASIC23.04■■□□□ 1.28
CDK5RAP1Q96SZ6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms