Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NEK1Q96PY6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.32■■□□□ 1.8
NEK1Q96PY6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NEK1Q96PY6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.32■■□□□ 1.8
NEK1Q96PY6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.32■■□□□ 1.8
NEK1Q96PY6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NEK1Q96PY6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
NEK1Q96PY6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NEK1Q96PY6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NEK1Q96PY6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.32■■□□□ 1.8
NEK1Q96PY6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NEK1Q96PY6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NEK1Q96PY6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
NEK1Q96PY6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.31■■□□□ 1.8
NEK1Q96PY6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.31■■□□□ 1.8
NEK1Q96PY6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.31■■□□□ 1.8
NEK1Q96PY6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NEK1Q96PY6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NEK1Q96PY6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK1Q96PY6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK1Q96PY6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK1Q96PY6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NEK1Q96PY6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 AL512631.2-201ENST00000604634 923 ntBASIC26.3■■□□□ 1.8
NEK1Q96PY6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 AC019069.1-201ENST00000610008 1333 ntBASIC26.3■■□□□ 1.8
NEK1Q96PY6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
NEK1Q96PY6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NEK1Q96PY6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.29■■□□□ 1.8
NEK1Q96PY6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK1Q96PY6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NEK1Q96PY6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK1Q96PY6 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.29■■□□□ 1.8
NEK1Q96PY6 AC131212.1-201ENST00000613771 668 ntBASIC26.29■■□□□ 1.8
NEK1Q96PY6 AC009086.3-201ENST00000623486 1008 ntBASIC26.29■■□□□ 1.8
NEK1Q96PY6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.29■■□□□ 1.8
NEK1Q96PY6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK1Q96PY6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.29■■□□□ 1.8
NEK1Q96PY6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK1Q96PY6 AC233723.2-201ENST00000623798 2106 ntBASIC26.29■■□□□ 1.8
NEK1Q96PY6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NEK1Q96PY6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NEK1Q96PY6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NEK1Q96PY6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.28■■□□□ 1.8
NEK1Q96PY6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.28■■□□□ 1.8
NEK1Q96PY6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.28■■□□□ 1.8
NEK1Q96PY6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.28■■□□□ 1.8
NEK1Q96PY6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.28■■□□□ 1.8
NEK1Q96PY6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
NEK1Q96PY6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NEK1Q96PY6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
NEK1Q96PY6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.27■■□□□ 1.8
NEK1Q96PY6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
NEK1Q96PY6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.27■■□□□ 1.8
NEK1Q96PY6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.27■■□□□ 1.8
NEK1Q96PY6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK1Q96PY6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.26■■□□□ 1.79
NEK1Q96PY6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.26■■□□□ 1.79
NEK1Q96PY6 AC241377.3-202ENST00000626088 1088 ntBASIC26.26■■□□□ 1.79
NEK1Q96PY6 AC241585.3-202ENST00000628937 1088 ntBASIC26.26■■□□□ 1.79
NEK1Q96PY6 AC245100.8-202ENST00000629247 1058 ntBASIC26.26■■□□□ 1.79
NEK1Q96PY6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.26■■□□□ 1.79
NEK1Q96PY6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
NEK1Q96PY6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK1Q96PY6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
NEK1Q96PY6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.25■■□□□ 1.79
NEK1Q96PY6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK1Q96PY6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NEK1Q96PY6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NEK1Q96PY6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
NEK1Q96PY6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK1Q96PY6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NEK1Q96PY6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.24■■□□□ 1.79
NEK1Q96PY6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK1Q96PY6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms