Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF183Q96D59 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 MIR939-201ENST00000401314 82 ntBASIC16.34■□□□□ 0.21
RNF183Q96D59 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF183Q96D59 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF183Q96D59 MIR3181-201ENST00000578512 73 ntBASIC16.34■□□□□ 0.21
RNF183Q96D59 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF183Q96D59 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.34■□□□□ 0.21
RNF183Q96D59 AC136469.2-201ENST00000623944 1028 ntBASIC16.34■□□□□ 0.21
RNF183Q96D59 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF183Q96D59 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF183Q96D59 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF183Q96D59 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RNF183Q96D59 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF183Q96D59 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF183Q96D59 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF183Q96D59 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF183Q96D59 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF183Q96D59 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF183Q96D59 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF183Q96D59 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF183Q96D59 AC091305.1-201ENST00000479476 895 ntBASIC16.33■□□□□ 0.2
RNF183Q96D59 AP001330.3-201ENST00000520123 633 ntBASIC16.33■□□□□ 0.2
RNF183Q96D59 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF183Q96D59 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF183Q96D59 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF183Q96D59 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF183Q96D59 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF183Q96D59 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF183Q96D59 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF183Q96D59 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF183Q96D59 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF183Q96D59 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF183Q96D59 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF183Q96D59 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF183Q96D59 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF183Q96D59 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF183Q96D59 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF183Q96D59 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF183Q96D59 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF183Q96D59 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNF183Q96D59 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF183Q96D59 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF183Q96D59 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF183Q96D59 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF183Q96D59 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF183Q96D59 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF183Q96D59 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF183Q96D59 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF183Q96D59 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF183Q96D59 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF183Q96D59 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF183Q96D59 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF183Q96D59 AC027682.1-201ENST00000562846 899 ntBASIC16.31■□□□□ 0.2
RNF183Q96D59 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF183Q96D59 pRNA.6-201ENST00000610482 90 ntBASIC16.31■□□□□ 0.2
RNF183Q96D59 pRNA.5-201ENST00000612139 90 ntBASIC16.31■□□□□ 0.2
RNF183Q96D59 pRNA.11-201ENST00000618423 90 ntBASIC16.31■□□□□ 0.2
RNF183Q96D59 pRNA.13-201ENST00000619112 90 ntBASIC16.31■□□□□ 0.2
RNF183Q96D59 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF183Q96D59 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF183Q96D59 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF183Q96D59 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 RASA4CP-201ENST00000424092 1398 ntBASIC16.3■□□□□ 0.2
RNF183Q96D59 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF183Q96D59 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF183Q96D59 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RNF183Q96D59 ZNRF2P3-201ENST00000424200 374 ntBASIC16.3■□□□□ 0.2
RNF183Q96D59 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF183Q96D59 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF183Q96D59 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF183Q96D59 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 FP325331.1-202ENST00000623531 1380 ntBASIC16.29■□□□□ 0.2
RNF183Q96D59 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF183Q96D59 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms