Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 RARRES2P6-201ENST00000567333 442 ntBASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDND2Q8NHS1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 AC027682.1-201ENST00000562846 899 ntBASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 AC008764.7-201ENST00000593779 1081 ntBASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 CA15P2-201ENST00000611168 834 ntBASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 AC136469.2-201ENST00000623944 1028 ntBASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 RASA4CP-201ENST00000424092 1398 ntBASIC18.81■□□□□ 0.6
CLDND2Q8NHS1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 MIR3181-201ENST00000578512 73 ntBASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLDND2Q8NHS1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDND2Q8NHS1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDND2Q8NHS1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 AC099791.1-201ENST00000416440 715 ntBASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLDND2Q8NHS1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms