Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 pRNA.6-201ENST00000610482 90 ntBASIC23.54■■□□□ 1.36
RNF135Q8IUD6 pRNA.5-201ENST00000612139 90 ntBASIC23.54■■□□□ 1.36
RNF135Q8IUD6 pRNA.11-201ENST00000618423 90 ntBASIC23.54■■□□□ 1.36
RNF135Q8IUD6 pRNA.13-201ENST00000619112 90 ntBASIC23.54■■□□□ 1.36
RNF135Q8IUD6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF135Q8IUD6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RNF135Q8IUD6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF135Q8IUD6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF135Q8IUD6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF135Q8IUD6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF135Q8IUD6 LINC02228-203ENST00000641970 1355 ntBASIC23.53■■□□□ 1.36
RNF135Q8IUD6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF135Q8IUD6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
RNF135Q8IUD6 RAP2CP1-201ENST00000605103 478 ntBASIC23.53■■□□□ 1.36
RNF135Q8IUD6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF135Q8IUD6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF135Q8IUD6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RNF135Q8IUD6 AP003733.4-201ENST00000623785 1697 ntBASIC23.51■■□□□ 1.35
RNF135Q8IUD6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.51■■□□□ 1.35
RNF135Q8IUD6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF135Q8IUD6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RNF135Q8IUD6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF135Q8IUD6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 CDCA4P2-201ENST00000441182 718 ntBASIC23.5■■□□□ 1.35
RNF135Q8IUD6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 AC104771.1-201ENST00000603335 964 ntBASIC23.5■■□□□ 1.35
RNF135Q8IUD6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF135Q8IUD6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 AL139125.2-201ENST00000623134 1869 ntBASIC23.49■■□□□ 1.35
RNF135Q8IUD6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF135Q8IUD6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 AC006015.1-201ENST00000429970 570 ntBASIC23.48■■□□□ 1.35
RNF135Q8IUD6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 AC066615.1-201ENST00000640911 628 ntBASIC23.48■■□□□ 1.35
RNF135Q8IUD6 AC073111.5-205ENST00000641717 521 ntBASIC23.48■■□□□ 1.35
RNF135Q8IUD6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.48■■□□□ 1.35
RNF135Q8IUD6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.47■■□□□ 1.35
RNF135Q8IUD6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.46■■□□□ 1.35
RNF135Q8IUD6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF135Q8IUD6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.45■■□□□ 1.34
RNF135Q8IUD6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.45■■□□□ 1.34
RNF135Q8IUD6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms