Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CISD3-206ENST00000619858 2326 ntTSL 1 (best)17.09■□□□□ 0.336e-7■■■■□ 23.7
LARP4Q71RC2 CISD3-205ENST00000616128 773 ntTSL 213.35□□□□□ -0.276e-7■■■■□ 23.7
LARP4Q71RC2 CD63-213ENST00000552164 845 ntTSL 217.5■□□□□ 0.391e-18■■■■□ 23.7
LARP4Q71RC2 TIMM17B-206ENST00000472645 804 ntTSL 314.43□□□□□ -0.11e-6■■■■□ 23.7
LARP4Q71RC2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.512e-11■■■■□ 23.7
LARP4Q71RC2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.61■□□□□ 0.412e-11■■■■□ 23.7
LARP4Q71RC2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.16■□□□□ 0.342e-11■■■■□ 23.7
LARP4Q71RC2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.74□□□□□ -0.212e-11■■■■□ 23.7
LARP4Q71RC2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.856e-6■■■■□ 23.6
LARP4Q71RC2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.245e-6■■■■□ 23.6
LARP4Q71RC2 ARHGAP11B-203ENST00000563110 2043 ntTSL 1 (best)16.27■□□□□ 0.26e-12■■■■□ 23.6
LARP4Q71RC2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.16e-12■■■■□ 23.6
LARP4Q71RC2 DGKQ-203ENST00000509465 4362 ntAPPRIS ALT2 TSL 514.44□□□□□ -0.16e-6■■■■□ 23.6
LARP4Q71RC2 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.285e-6■■■■□ 23.6
LARP4Q71RC2 XYLB-204ENST00000472721 546 ntTSL 412.25□□□□□ -0.455e-7■■■■□ 23.6
LARP4Q71RC2 NOLC1-204ENST00000464969 2288 ntTSL 210.87□□□□□ -0.672e-8■■■■□ 23.6
LARP4Q71RC2 ARHGAP11B-206ENST00000566548 484 ntTSL 310.61□□□□□ -0.716e-12■■■■□ 23.6
LARP4Q71RC2 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.765e-7■■■■□ 23.6
LARP4Q71RC2 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.862e-8■■■■□ 23.6
LARP4Q71RC2 XYLB-202ENST00000424034 3484 ntTSL 29.36□□□□□ -0.915e-7■■■■□ 23.6
LARP4Q71RC2 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.032e-8■■■■□ 23.6
LARP4Q71RC2 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.27□□□□□ -1.092e-8■■■■□ 23.6
LARP4Q71RC2 NOLC1-208ENST00000603946 3217 ntTSL 1 (best)7.72□□□□□ -1.172e-8■■■■□ 23.6
LARP4Q71RC2 NOLC1-201ENST00000370007 3727 ntTSL 1 (best)6.65□□□□□ -1.352e-8■■■■□ 23.6
LARP4Q71RC2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.99□□□□□ -1.456e-6■■■■□ 23.6
LARP4Q71RC2 NOLC1-206ENST00000477977 660 ntTSL 35.86□□□□□ -1.472e-8■■■■□ 23.6
LARP4Q71RC2 RNU2-61P-201ENST00000411069 191 ntBASIC3.19□□□□□ -1.92e-8■■■■□ 23.6
LARP4Q71RC2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.158e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.79□□□□□ -0.048e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.18e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-211ENST00000520916 2669 ntTSL 213.34□□□□□ -0.278e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-208ENST00000519657 1005 ntTSL 210.7□□□□□ -0.78e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-218ENST00000523104 453 ntTSL 39.43□□□□□ -0.98e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-206ENST00000519359 839 ntTSL 57.52□□□□□ -1.218e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-213ENST00000521370 645 ntTSL 36.46□□□□□ -1.388e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-212ENST00000520971 315 ntTSL 24.81□□□□□ -1.648e-12■■■■□ 23.6
LARP4Q71RC2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.96□□□□□ -0.172e-6■■■■□ 23.6
LARP4Q71RC2 HBM-202ENST00000472539 592 ntTSL 519.15■□□□□ 0.666e-14■■■■□ 23.5
LARP4Q71RC2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.236e-14■■■■□ 23.5
LARP4Q71RC2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.089e-14■■■■□ 23.5
LARP4Q71RC2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.95□□□□□ -0.029e-14■■■■□ 23.5
LARP4Q71RC2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.029e-14■■■■□ 23.5
LARP4Q71RC2 IL32-210ENST00000525377 997 ntAPPRIS ALT2 TSL 514.52□□□□□ -0.099e-14■■■■□ 23.5
LARP4Q71RC2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.099e-14■■■■□ 23.5
LARP4Q71RC2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.099e-14■■■■□ 23.5
LARP4Q71RC2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.149e-14■■■■□ 23.5
LARP4Q71RC2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.169e-14■■■■□ 23.5
LARP4Q71RC2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.169e-14■■■■□ 23.5
LARP4Q71RC2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.169e-14■■■■□ 23.5
LARP4Q71RC2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.179e-14■■■■□ 23.5
LARP4Q71RC2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.179e-14■■■■□ 23.5
LARP4Q71RC2 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.499e-14■■■■□ 23.5
LARP4Q71RC2 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.579e-14■■■■□ 23.5
LARP4Q71RC2 IL32-229ENST00000549213 654 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.699e-14■■■■□ 23.5
LARP4Q71RC2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-8■■■■□ 23.5
LARP4Q71RC2 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.42e-8■■■■□ 23.5
LARP4Q71RC2 AC024592.3-201ENST00000592091 2118 ntTSL 217.66■□□□□ 0.422e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.7■□□□□ 0.262e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.22e-10■■■■□ 23.5
LARP4Q71RC2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.31■□□□□ 0.042e-10■■■■□ 23.5
LARP4Q71RC2 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 215.31■□□□□ 0.042e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.26■□□□□ 0.032e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-206ENST00000593233 657 ntTSL 314.77□□□□□ -0.052e-10■■■■□ 23.5
LARP4Q71RC2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.252e-8■■■■□ 23.4
LARP4Q71RC2 GPX2-202ENST00000553522 1134 ntTSL 1 (best)10.66□□□□□ -0.72e-8■■■■□ 23.4
LARP4Q71RC2 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.962e-8■■■■□ 23.4
LARP4Q71RC2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.282e-8■■■■□ 23.4
LARP4Q71RC2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.55□□□□□ -1.689e-7■■■■□ 23.4
LARP4Q71RC2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.5□□□□□ -1.699e-7■■■■□ 23.4
LARP4Q71RC2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.979e-7■■■■□ 23.4
LARP4Q71RC2 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC11.84□□□□□ -0.511e-12■■■■□ 23.4
LARP4Q71RC2 SCAF11-209ENST00000547018 3271 ntTSL 512.55□□□□□ -0.46e-7■■■■□ 23.4
LARP4Q71RC2 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.96e-7■■■■□ 23.4
LARP4Q71RC2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.032e-6■■■■□ 23.4
LARP4Q71RC2 CD320-206ENST00000599573 861 ntTSL 216.07■□□□□ 0.167e-9■■■■□ 23.4
LARP4Q71RC2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.483e-7■■■■□ 23.4
LARP4Q71RC2 SLC22A4-203ENST00000491257 564 ntTSL 410.17□□□□□ -0.783e-7■■■■□ 23.4
LARP4Q71RC2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.2□□□□□ -0.35e-6■■■■□ 23.4
LARP4Q71RC2 MBD6-204ENST00000547545 1884 ntTSL 1 (best)19.26■□□□□ 0.673e-7■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-204ENST00000586720 1736 ntTSL 516.64■□□□□ 0.253e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.45■□□□□ 0.223e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-205ENST00000587251 2091 ntTSL 516.4■□□□□ 0.223e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-207ENST00000587311 1905 ntTSL 216.39■□□□□ 0.213e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.353e-44■■■■□ 23.4
LARP4Q71RC2 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.014e-7■■■■□ 23.3
LARP4Q71RC2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.962e-20■■■■□ 23.3
LARP4Q71RC2 A1BG-202ENST00000595014 2301 ntTSL 219.09■□□□□ 0.652e-20■■■■□ 23.3
LARP4Q71RC2 A1BG-204ENST00000598345 475 ntTSL 1 (best)19.01■□□□□ 0.632e-20■■■■□ 23.3
LARP4Q71RC2 AC012313.3-201ENST00000600123 1765 ntTSL 1 (best)18.36■□□□□ 0.532e-20■■■■□ 23.3
LARP4Q71RC2 A1BG-203ENST00000596924 2134 ntTSL 1 (best)18.13■□□□□ 0.492e-20■■■■□ 23.3
LARP4Q71RC2 MESD-205ENST00000560244 981 ntTSL 58.39□□□□□ -1.077e-8■■■■□ 23.3
LARP4Q71RC2 ATP6V0E2-205ENST00000464683 495 ntTSL 515.66■□□□□ 0.11e-9■■■■□ 23.3
LARP4Q71RC2 APRT-203ENST00000562464 515 ntTSL 317.27■□□□□ 0.364e-9■■■■□ 23.3
LARP4Q71RC2 APRT-211ENST00000569616 788 ntTSL 515.43■□□□□ 0.063e-9■■■■□ 23.3
LARP4Q71RC2 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.93□□□□□ -0.183e-9■■■■□ 23.3
Retrieved 100 of 15,922 protein–RNA pairs in 149.9 ms