Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CISD3-206ENST00000619858 2326 ntTSL 1 (best)17.09■□□□□ 0.336e-7■■■■□ 23.7
LARP4Q71RC2 CISD3-205ENST00000616128 773 ntTSL 213.35□□□□□ -0.276e-7■■■■□ 23.7
LARP4Q71RC2 CD63-213ENST00000552164 845 ntTSL 217.5■□□□□ 0.391e-18■■■■□ 23.7
LARP4Q71RC2 TIMM17B-206ENST00000472645 804 ntTSL 314.43□□□□□ -0.11e-6■■■■□ 23.7
LARP4Q71RC2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.512e-11■■■■□ 23.7
LARP4Q71RC2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.61■□□□□ 0.412e-11■■■■□ 23.7
LARP4Q71RC2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.16■□□□□ 0.342e-11■■■■□ 23.7
LARP4Q71RC2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.74□□□□□ -0.212e-11■■■■□ 23.7
LARP4Q71RC2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.856e-6■■■■□ 23.6
LARP4Q71RC2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.245e-6■■■■□ 23.6
LARP4Q71RC2 ARHGAP11B-203ENST00000563110 2043 ntTSL 1 (best)16.27■□□□□ 0.26e-12■■■■□ 23.6
LARP4Q71RC2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.16e-12■■■■□ 23.6
LARP4Q71RC2 DGKQ-203ENST00000509465 4362 ntAPPRIS ALT2 TSL 514.44□□□□□ -0.16e-6■■■■□ 23.6
LARP4Q71RC2 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.285e-6■■■■□ 23.6
LARP4Q71RC2 XYLB-204ENST00000472721 546 ntTSL 412.25□□□□□ -0.455e-7■■■■□ 23.6
LARP4Q71RC2 NOLC1-204ENST00000464969 2288 ntTSL 210.87□□□□□ -0.672e-8■■■■□ 23.6
LARP4Q71RC2 ARHGAP11B-206ENST00000566548 484 ntTSL 310.61□□□□□ -0.716e-12■■■■□ 23.6
LARP4Q71RC2 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.765e-7■■■■□ 23.6
LARP4Q71RC2 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.862e-8■■■■□ 23.6
LARP4Q71RC2 XYLB-202ENST00000424034 3484 ntTSL 29.36□□□□□ -0.915e-7■■■■□ 23.6
LARP4Q71RC2 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.032e-8■■■■□ 23.6
LARP4Q71RC2 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.27□□□□□ -1.092e-8■■■■□ 23.6
LARP4Q71RC2 NOLC1-208ENST00000603946 3217 ntTSL 1 (best)7.72□□□□□ -1.172e-8■■■■□ 23.6
LARP4Q71RC2 NOLC1-201ENST00000370007 3727 ntTSL 1 (best)6.65□□□□□ -1.352e-8■■■■□ 23.6
LARP4Q71RC2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.99□□□□□ -1.456e-6■■■■□ 23.6
LARP4Q71RC2 NOLC1-206ENST00000477977 660 ntTSL 35.86□□□□□ -1.472e-8■■■■□ 23.6
LARP4Q71RC2 RNU2-61P-201ENST00000411069 191 ntBASIC3.19□□□□□ -1.92e-8■■■■□ 23.6
LARP4Q71RC2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.158e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.79□□□□□ -0.048e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.18e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-211ENST00000520916 2669 ntTSL 213.34□□□□□ -0.278e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-208ENST00000519657 1005 ntTSL 210.7□□□□□ -0.78e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-218ENST00000523104 453 ntTSL 39.43□□□□□ -0.98e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-206ENST00000519359 839 ntTSL 57.52□□□□□ -1.218e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-213ENST00000521370 645 ntTSL 36.46□□□□□ -1.388e-12■■■■□ 23.6
LARP4Q71RC2 RBPMS-212ENST00000520971 315 ntTSL 24.81□□□□□ -1.648e-12■■■■□ 23.6
LARP4Q71RC2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.96□□□□□ -0.172e-6■■■■□ 23.6
LARP4Q71RC2 HBM-202ENST00000472539 592 ntTSL 519.15■□□□□ 0.666e-14■■■■□ 23.5
LARP4Q71RC2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.236e-14■■■■□ 23.5
LARP4Q71RC2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.089e-14■■■■□ 23.5
LARP4Q71RC2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.049e-14■■■■□ 23.5
LARP4Q71RC2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.95□□□□□ -0.029e-14■■■■□ 23.5
LARP4Q71RC2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.029e-14■■■■□ 23.5
LARP4Q71RC2 IL32-210ENST00000525377 997 ntAPPRIS ALT2 TSL 514.52□□□□□ -0.099e-14■■■■□ 23.5
LARP4Q71RC2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.099e-14■■■■□ 23.5
LARP4Q71RC2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.099e-14■■■■□ 23.5
LARP4Q71RC2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.149e-14■■■■□ 23.5
LARP4Q71RC2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.169e-14■■■■□ 23.5
LARP4Q71RC2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.169e-14■■■■□ 23.5
LARP4Q71RC2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.169e-14■■■■□ 23.5
LARP4Q71RC2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.179e-14■■■■□ 23.5
LARP4Q71RC2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.179e-14■■■■□ 23.5
LARP4Q71RC2 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.499e-14■■■■□ 23.5
LARP4Q71RC2 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.579e-14■■■■□ 23.5
LARP4Q71RC2 IL32-229ENST00000549213 654 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.699e-14■■■■□ 23.5
LARP4Q71RC2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-8■■■■□ 23.5
LARP4Q71RC2 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.42e-8■■■■□ 23.5
LARP4Q71RC2 AC024592.3-201ENST00000592091 2118 ntTSL 217.66■□□□□ 0.422e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.7■□□□□ 0.262e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.22e-10■■■■□ 23.5
LARP4Q71RC2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.31■□□□□ 0.042e-10■■■■□ 23.5
LARP4Q71RC2 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 215.31■□□□□ 0.042e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.26■□□□□ 0.032e-10■■■■□ 23.5
LARP4Q71RC2 NDUFA11-206ENST00000593233 657 ntTSL 314.77□□□□□ -0.052e-10■■■■□ 23.5
LARP4Q71RC2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.252e-8■■■■□ 23.4
LARP4Q71RC2 GPX2-202ENST00000553522 1134 ntTSL 1 (best)10.66□□□□□ -0.72e-8■■■■□ 23.4
LARP4Q71RC2 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.962e-8■■■■□ 23.4
LARP4Q71RC2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.282e-8■■■■□ 23.4
LARP4Q71RC2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.55□□□□□ -1.689e-7■■■■□ 23.4
LARP4Q71RC2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.5□□□□□ -1.699e-7■■■■□ 23.4
LARP4Q71RC2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.979e-7■■■■□ 23.4
LARP4Q71RC2 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC11.84□□□□□ -0.511e-12■■■■□ 23.4
LARP4Q71RC2 SCAF11-209ENST00000547018 3271 ntTSL 512.55□□□□□ -0.46e-7■■■■□ 23.4
LARP4Q71RC2 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.96e-7■■■■□ 23.4
LARP4Q71RC2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.032e-6■■■■□ 23.4
LARP4Q71RC2 CD320-206ENST00000599573 861 ntTSL 216.07■□□□□ 0.167e-9■■■■□ 23.4
LARP4Q71RC2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.483e-7■■■■□ 23.4
LARP4Q71RC2 SLC22A4-203ENST00000491257 564 ntTSL 410.17□□□□□ -0.783e-7■■■■□ 23.4
LARP4Q71RC2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.2□□□□□ -0.35e-6■■■■□ 23.4
LARP4Q71RC2 MBD6-204ENST00000547545 1884 ntTSL 1 (best)19.26■□□□□ 0.673e-7■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-204ENST00000586720 1736 ntTSL 516.64■□□□□ 0.253e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.45■□□□□ 0.223e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-205ENST00000587251 2091 ntTSL 516.4■□□□□ 0.223e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-207ENST00000587311 1905 ntTSL 216.39■□□□□ 0.213e-44■■■■□ 23.4
LARP4Q71RC2 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.353e-44■■■■□ 23.4
LARP4Q71RC2 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.014e-7■■■■□ 23.3
LARP4Q71RC2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.962e-20■■■■□ 23.3
LARP4Q71RC2 A1BG-202ENST00000595014 2301 ntTSL 219.09■□□□□ 0.652e-20■■■■□ 23.3
LARP4Q71RC2 A1BG-204ENST00000598345 475 ntTSL 1 (best)19.01■□□□□ 0.632e-20■■■■□ 23.3
LARP4Q71RC2 AC012313.3-201ENST00000600123 1765 ntTSL 1 (best)18.36■□□□□ 0.532e-20■■■■□ 23.3
LARP4Q71RC2 A1BG-203ENST00000596924 2134 ntTSL 1 (best)18.13■□□□□ 0.492e-20■■■■□ 23.3
LARP4Q71RC2 MESD-205ENST00000560244 981 ntTSL 58.39□□□□□ -1.077e-8■■■■□ 23.3
LARP4Q71RC2 ATP6V0E2-205ENST00000464683 495 ntTSL 515.66■□□□□ 0.11e-9■■■■□ 23.3
LARP4Q71RC2 APRT-203ENST00000562464 515 ntTSL 317.27■□□□□ 0.364e-9■■■■□ 23.3
LARP4Q71RC2 APRT-211ENST00000569616 788 ntTSL 515.43■□□□□ 0.063e-9■■■■□ 23.3
LARP4Q71RC2 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.93□□□□□ -0.183e-9■■■■□ 23.3
Retrieved 100 of 15,922 protein–RNA pairs in 149.9 ms