RNA–Protein interactions for RNA: ENST00000477977.1

NOLC1-206, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 3

Gene NOLC1, Length 660 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-206ENST00000477977 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
NOLC1-206ENST00000477977 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
NOLC1-206ENST00000477977 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
NOLC1-206ENST00000477977 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
NOLC1-206ENST00000477977 NISCHQ9Y2I1 1504 aa16.39■□□□□ 0.21
NOLC1-206ENST00000477977 FOXD1Q16676 465 aa16.24■□□□□ 0.19
NOLC1-206ENST00000477977 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
NOLC1-206ENST00000477977 MSH5O43196 834 aa15.15■□□□□ 0.02
NOLC1-206ENST00000477977 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
NOLC1-206ENST00000477977 PIAS4Q8N2W9 510 aaPredicted RBP15.12■□□□□ 0.01
NOLC1-206ENST00000477977 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
NOLC1-206ENST00000477977 ADRA2BP18089 450 aa15.06■□□□□ 0
NOLC1-206ENST00000477977 CCDC180Q9P1Z9 1646 aa14.75□□□□□ -0.05
NOLC1-206ENST00000477977 ABCC9O60706 1549 aa14.44□□□□□ -0.1
NOLC1-206ENST00000477977 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
NOLC1-206ENST00000477977 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
NOLC1-206ENST00000477977 NACADO15069 1562 aa13.88□□□□□ -0.19
NOLC1-206ENST00000477977 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
NOLC1-206ENST00000477977 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
NOLC1-206ENST00000477977 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
NOLC1-206ENST00000477977 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
NOLC1-206ENST00000477977 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
NOLC1-206ENST00000477977 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
NOLC1-206ENST00000477977 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
NOLC1-206ENST00000477977 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
NOLC1-206ENST00000477977 SHROOM4Q9ULL8 1493 aa13.47□□□□□ -0.25
NOLC1-206ENST00000477977 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
NOLC1-206ENST00000477977 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
NOLC1-206ENST00000477977 PPP4R3CPQ6ZMV5 832 aa13.36□□□□□ -0.27
NOLC1-206ENST00000477977 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
NOLC1-206ENST00000477977 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
NOLC1-206ENST00000477977 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
NOLC1-206ENST00000477977 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
NOLC1-206ENST00000477977 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
NOLC1-206ENST00000477977 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
NOLC1-206ENST00000477977 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
NOLC1-206ENST00000477977 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
NOLC1-206ENST00000477977 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
NOLC1-206ENST00000477977 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
NOLC1-206ENST00000477977 NCAPD3P42695 1498 aa12.8□□□□□ -0.36
NOLC1-206ENST00000477977 SMARCA4P51532 1647 aa12.77□□□□□ -0.37
NOLC1-206ENST00000477977 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
NOLC1-206ENST00000477977 PEG3Q9GZU2 1588 aa12.74□□□□□ -0.37
NOLC1-206ENST00000477977 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
NOLC1-206ENST00000477977 ATAD2BQ9ULI0 1458 aa12.73□□□□□ -0.37
NOLC1-206ENST00000477977 BAZ1AQ9NRL2 1556 aaPredicted RBP12.73□□□□□ -0.37
NOLC1-206ENST00000477977 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
NOLC1-206ENST00000477977 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
NOLC1-206ENST00000477977 NPM3O75607 178 aaKnown RBP12.62□□□□□ -0.39
NOLC1-206ENST00000477977 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
NOLC1-206ENST00000477977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.48e-8■■■□□ 15.6
NOLC1-206ENST00000477977 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
NOLC1-206ENST00000477977 CUX2O14529 1486 aa12.53□□□□□ -0.4
NOLC1-206ENST00000477977 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
NOLC1-206ENST00000477977 ERCC6Q03468 1493 aa12.46□□□□□ -0.42
NOLC1-206ENST00000477977 NESP48681 1621 aa12.44□□□□□ -0.42
NOLC1-206ENST00000477977 WIZO95785 1651 aa12.42□□□□□ -0.42
NOLC1-206ENST00000477977 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
NOLC1-206ENST00000477977 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
NOLC1-206ENST00000477977 PDS5BQ9NTI5 1447 aa12.36□□□□□ -0.43
NOLC1-206ENST00000477977 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
NOLC1-206ENST00000477977 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
NOLC1-206ENST00000477977 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
NOLC1-206ENST00000477977 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
NOLC1-206ENST00000477977 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
NOLC1-206ENST00000477977 KCNA4P22459 653 aa12.29□□□□□ -0.44
NOLC1-206ENST00000477977 CFTRP13569 1480 aa12.28□□□□□ -0.44
NOLC1-206ENST00000477977 WDR62O43379 1518 aa12.27□□□□□ -0.44
NOLC1-206ENST00000477977 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
NOLC1-206ENST00000477977 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
NOLC1-206ENST00000477977 PRDM2Q13029 1718 aa12.22□□□□□ -0.45
NOLC1-206ENST00000477977 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
NOLC1-206ENST00000477977 FANCD2Q9BXW9 1451 aa12.2□□□□□ -0.46
NOLC1-206ENST00000477977 CAPN15O75808 1086 aa12.16□□□□□ -0.46
NOLC1-206ENST00000477977 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
NOLC1-206ENST00000477977 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
NOLC1-206ENST00000477977 DSG3P32926 999 aa12.11□□□□□ -0.47
NOLC1-206ENST00000477977 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
NOLC1-206ENST00000477977 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
NOLC1-206ENST00000477977 TOPBP1Q92547 1522 aa12□□□□□ -0.49
NOLC1-206ENST00000477977 DNMBPQ6XZF7 1577 aa12□□□□□ -0.49
NOLC1-206ENST00000477977 IFT140Q96RY7 1462 aa11.99□□□□□ -0.49
NOLC1-206ENST00000477977 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
NOLC1-206ENST00000477977 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
NOLC1-206ENST00000477977 ABCB7O75027 752 aa11.93□□□□□ -0.5
NOLC1-206ENST00000477977 EIF4G3O43432 1585 aaKnown RBP11.91□□□□□ -0.5
NOLC1-206ENST00000477977 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
NOLC1-206ENST00000477977 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
NOLC1-206ENST00000477977 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
NOLC1-206ENST00000477977 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
NOLC1-206ENST00000477977 CUX1P39880 1505 aa11.82□□□□□ -0.52
NOLC1-206ENST00000477977 POTEHQ6S545 545 aa11.82□□□□□ -0.52
NOLC1-206ENST00000477977 ZNF219Q9P2Y4 722 aaPredicted RBP11.82□□□□□ -0.52
NOLC1-206ENST00000477977 APLP2Q06481 763 aa11.8□□□□□ -0.52
NOLC1-206ENST00000477977 FGD5Q6ZNL6 1462 aa11.8□□□□□ -0.52
NOLC1-206ENST00000477977 SOGA1O94964 1423 aa11.78□□□□□ -0.52
NOLC1-206ENST00000477977 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.523e-7■■■□□ 17.7
NOLC1-206ENST00000477977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.78□□□□□ -0.52
NOLC1-206ENST00000477977 HNRNPUL2Q1KMD3 747 aaKnown RBP11.78□□□□□ -0.52
NOLC1-206ENST00000477977 CHD1O14646 1710 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms