RNA–Protein interactions for RNA: ENST00000411069.1

RNU2-61P-201, Transcript of RNA, U2 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU2-61P, Length 191 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-61P-201ENST00000411069 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
RNU2-61P-201ENST00000411069 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
RNU2-61P-201ENST00000411069 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
RNU2-61P-201ENST00000411069 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
RNU2-61P-201ENST00000411069 FOXD1Q16676 465 aa12.93□□□□□ -0.34
RNU2-61P-201ENST00000411069 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
RNU2-61P-201ENST00000411069 PLPPR3Q6T4P5 718 aa12.21□□□□□ -0.45
RNU2-61P-201ENST00000411069 MSH5O43196 834 aa12.12□□□□□ -0.47
RNU2-61P-201ENST00000411069 PIAS4Q8N2W9 510 aaPredicted RBP12.04□□□□□ -0.48
RNU2-61P-201ENST00000411069 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
RNU2-61P-201ENST00000411069 ADRA2BP18089 450 aa11.98□□□□□ -0.49
RNU2-61P-201ENST00000411069 MAPK8IP2Q13387 824 aaPredicted RBP11.03□□□□□ -0.64
RNU2-61P-201ENST00000411069 DMRT2Q9Y5R5 561 aa10.99□□□□□ -0.65
RNU2-61P-201ENST00000411069 SCAF1Q9H7N4 1312 aaKnown RBP10.94□□□□□ -0.66
RNU2-61P-201ENST00000411069 CACNB1Q02641 598 aaPredicted RBP10.71□□□□□ -0.69
RNU2-61P-201ENST00000411069 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
RNU2-61P-201ENST00000411069 HOXD11P31277 338 aaPredicted RBP10.55□□□□□ -0.72
RNU2-61P-201ENST00000411069 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
RNU2-61P-201ENST00000411069 DCAF8L1A6NGE4 600 aa10.48□□□□□ -0.73
RNU2-61P-201ENST00000411069 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
RNU2-61P-201ENST00000411069 RNF39Q9H2S5 420 aa10.36□□□□□ -0.75
RNU2-61P-201ENST00000411069 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
RNU2-61P-201ENST00000411069 DNAJC5BQ9UF47 199 aa10.23□□□□□ -0.77
RNU2-61P-201ENST00000411069 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
RNU2-61P-201ENST00000411069 NPM3O75607 178 aaKnown RBP10.12□□□□□ -0.79
RNU2-61P-201ENST00000411069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.81
RNU2-61P-201ENST00000411069 POTEHQ6S545 545 aa9.9□□□□□ -0.82
RNU2-61P-201ENST00000411069 KCNA4P22459 653 aa9.85□□□□□ -0.83
RNU2-61P-201ENST00000411069 U3KPZ7 1027 aaPredicted RBP9.83□□□□□ -0.84
RNU2-61P-201ENST00000411069 SLC4A2P04920 1241 aa9.7□□□□□ -0.86
RNU2-61P-201ENST00000411069 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
RNU2-61P-201ENST00000411069 CAPN15O75808 1086 aa9.66□□□□□ -0.86
RNU2-61P-201ENST00000411069 DSG3P32926 999 aa9.66□□□□□ -0.86
RNU2-61P-201ENST00000411069 APLP2Q06481 763 aa9.51□□□□□ -0.89
RNU2-61P-201ENST00000411069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
RNU2-61P-201ENST00000411069 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
RNU2-61P-201ENST00000411069 ZNF219Q9P2Y4 722 aaPredicted RBP9.49□□□□□ -0.89
RNU2-61P-201ENST00000411069 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
RNU2-61P-201ENST00000411069 SAMD1Q6SPF0 538 aaPredicted RBP9.45□□□□□ -0.9
RNU2-61P-201ENST00000411069 ABCB7O75027 752 aa9.43□□□□□ -0.9
RNU2-61P-201ENST00000411069 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
RNU2-61P-201ENST00000411069 SLC4A1APQ9BWU0 796 aaKnown RBP9.27□□□□□ -0.93
RNU2-61P-201ENST00000411069 POLA2Q14181 598 aa9.23□□□□□ -0.93
RNU2-61P-201ENST00000411069 FOXD4L1Q9NU39 408 aa9.21□□□□□ -0.94
RNU2-61P-201ENST00000411069 RBM42Q9BTD8 480 aaKnown RBP9.2□□□□□ -0.94
RNU2-61P-201ENST00000411069 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.94
RNU2-61P-201ENST00000411069 ZBTB22O15209 634 aa9.08□□□□□ -0.96
RNU2-61P-201ENST00000411069 CHRDL2Q6WN34 429 aa9.04□□□□□ -0.96
RNU2-61P-201ENST00000411069 ZBTB12Q9Y330 459 aaPredicted RBP9.04□□□□□ -0.96
RNU2-61P-201ENST00000411069 SP7Q8TDD2 431 aaPredicted RBP9□□□□□ -0.97
RNU2-61P-201ENST00000411069 AKT1S1Q96B36 256 aa8.99□□□□□ -0.97
RNU2-61P-201ENST00000411069 ATXN8OSP0DMR3 200 aa8.95□□□□□ -0.98
RNU2-61P-201ENST00000411069 OSCARQ8IYS5 282 aa8.95□□□□□ -0.98
RNU2-61P-201ENST00000411069 REM2Q8IYK8 340 aaPredicted RBP8.9□□□□□ -0.98
RNU2-61P-201ENST00000411069 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
RNU2-61P-201ENST00000411069 PITPNM1O00562 1244 aa8.8□□□□□ -1
RNU2-61P-201ENST00000411069 SPDYE2BA6NHP3 402 aa8.77□□□□□ -1.01
RNU2-61P-201ENST00000411069 SPDYE6P0CI01 402 aa8.77□□□□□ -1.01
RNU2-61P-201ENST00000411069 FBLN2P98095 1184 aa8.77□□□□□ -1.01
RNU2-61P-201ENST00000411069 SPDYE2Q495Y8 402 aa8.77□□□□□ -1.01
RNU2-61P-201ENST00000411069 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
RNU2-61P-201ENST00000411069 MKRN4PQ13434 485 aaPredicted RBP8.74□□□□□ -1.01
RNU2-61P-201ENST00000411069 HAX1O00165 279 aa8.66□□□□□ -1.02
RNU2-61P-201ENST00000411069 SSUH2Q9Y2M2 353 aa8.66□□□□□ -1.02
RNU2-61P-201ENST00000411069 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
RNU2-61P-201ENST00000411069 ZNF692Q9BU19 519 aaPredicted RBP8.62□□□□□ -1.03
RNU2-61P-201ENST00000411069 CLEC11AQ9Y240 323 aa8.58□□□□□ -1.04
RNU2-61P-201ENST00000411069 EVX2Q03828 476 aa8.57□□□□□ -1.04
RNU2-61P-201ENST00000411069 CSRNP3Q8WYN3 585 aa8.57□□□□□ -1.04
RNU2-61P-201ENST00000411069 PRKAR2AP13861 404 aaKnown RBP8.56□□□□□ -1.04
RNU2-61P-201ENST00000411069 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNU2-61P-201ENST00000411069 C19orf67A6NJJ6 358 aa8.48□□□□□ -1.05
RNU2-61P-201ENST00000411069 PLSCR2Q9NRY7 297 aa8.45□□□□□ -1.06
RNU2-61P-201ENST00000411069 PRR29P0C7W0 189 aa8.44□□□□□ -1.06
RNU2-61P-201ENST00000411069 CHADLQ6NUI6 762 aa8.44□□□□□ -1.06
RNU2-61P-201ENST00000411069 LHX8Q68G74 356 aa8.42□□□□□ -1.06
RNU2-61P-201ENST00000411069 EHMT2Q96KQ7 1210 aa8.38□□□□□ -1.07
RNU2-61P-201ENST00000411069 GABBR2O75899 941 aa8.36□□□□□ -1.07
RNU2-61P-201ENST00000411069 FARP1Q9Y4F1 1045 aaPredicted RBP8.33□□□□□ -1.08
RNU2-61P-201ENST00000411069 CD44P16070 742 aaKnown RBP8.29□□□□□ -1.08
RNU2-61P-201ENST00000411069 SPDYE4A6NLX3 237 aa8.25□□□□□ -1.09
RNU2-61P-201ENST00000411069 STAG3Q9UJ98 1225 aa8.25□□□□□ -1.09
RNU2-61P-201ENST00000411069 CREBZFQ9NS37 354 aa8.24□□□□□ -1.09
RNU2-61P-201ENST00000411069 CLCN6P51797 869 aa8.21□□□□□ -1.1
RNU2-61P-201ENST00000411069 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
RNU2-61P-201ENST00000411069 ZNF579Q8NAF0 562 aaKnown RBP8.18□□□□□ -1.1
RNU2-61P-201ENST00000411069 ZRANB1Q9UGI0 708 aa8.15□□□□□ -1.1
RNU2-61P-201ENST00000411069 MNX1P50219 401 aaPredicted RBP8.11□□□□□ -1.11
RNU2-61P-201ENST00000411069 PROM2Q8N271 834 aa8.1□□□□□ -1.11
RNU2-61P-201ENST00000411069 DCBLD2Q96PD2 775 aa8.09□□□□□ -1.11
RNU2-61P-201ENST00000411069 GALR2O43603 387 aaPredicted RBP8.07□□□□□ -1.12
RNU2-61P-201ENST00000411069 NPM1P06748 294 aaKnown RBP eCLIP8.06□□□□□ -1.12
RNU2-61P-201ENST00000411069 PCDH10Q9P2E7 1040 aa8.06□□□□□ -1.12
RNU2-61P-201ENST00000411069 PAK3O75914 559 aaPredicted RBP8.05□□□□□ -1.12
RNU2-61P-201ENST00000411069 PHF12Q96QT6 1004 aa8.05□□□□□ -1.12
RNU2-61P-201ENST00000411069 POTEMA6NI47 508 aa7.96□□□□□ -1.14
RNU2-61P-201ENST00000411069 PELP1Q8IZL8 1130 aaKnown RBP7.94□□□□□ -1.14
RNU2-61P-201ENST00000411069 MS4A3Q96HJ5 214 aa7.94□□□□□ -1.14
RNU2-61P-201ENST00000411069 POTEB2H3BUK9 544 aa7.92□□□□□ -1.14
RNU2-61P-201ENST00000411069 ASTLQ6HA08 431 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms