Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.69■■□□□ 1.54
TRIM60Q495X7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM60Q495X7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.69■■□□□ 1.54
TRIM60Q495X7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM60Q495X7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.69■■□□□ 1.54
TRIM60Q495X7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM60Q495X7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM60Q495X7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM60Q495X7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM60Q495X7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM60Q495X7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM60Q495X7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
TRIM60Q495X7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM60Q495X7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM60Q495X7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.67■■□□□ 1.54
TRIM60Q495X7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM60Q495X7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM60Q495X7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM60Q495X7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.67■■□□□ 1.54
TRIM60Q495X7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.67■■□□□ 1.54
TRIM60Q495X7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM60Q495X7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TRIM60Q495X7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM60Q495X7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.66■■□□□ 1.54
TRIM60Q495X7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.66■■□□□ 1.54
TRIM60Q495X7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM60Q495X7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.66■■□□□ 1.54
TRIM60Q495X7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM60Q495X7 NCF1B-203ENST00000435988 1254 ntBASIC24.66■■□□□ 1.54
TRIM60Q495X7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.66■■□□□ 1.54
TRIM60Q495X7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TRIM60Q495X7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
TRIM60Q495X7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TRIM60Q495X7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
TRIM60Q495X7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
TRIM60Q495X7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 DUX4L4-201ENST00000566884 1269 ntBASIC24.65■■□□□ 1.54
TRIM60Q495X7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.65■■□□□ 1.54
TRIM60Q495X7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRIM60Q495X7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TRIM60Q495X7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.64■■□□□ 1.54
TRIM60Q495X7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.64■■□□□ 1.54
TRIM60Q495X7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.64■■□□□ 1.53
TRIM60Q495X7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TRIM60Q495X7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.64■■□□□ 1.53
TRIM60Q495X7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM60Q495X7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM60Q495X7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM60Q495X7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.63■■□□□ 1.53
TRIM60Q495X7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.63■■□□□ 1.53
TRIM60Q495X7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.63■■□□□ 1.53
TRIM60Q495X7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM60Q495X7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.63■■□□□ 1.53
TRIM60Q495X7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM60Q495X7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.63■■□□□ 1.53
TRIM60Q495X7 FP325331.1-202ENST00000623531 1380 ntBASIC24.63■■□□□ 1.53
TRIM60Q495X7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM60Q495X7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
TRIM60Q495X7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM60Q495X7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM60Q495X7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM60Q495X7 MIR663A-201ENST00000385250 93 ntBASIC24.62■■□□□ 1.53
TRIM60Q495X7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM60Q495X7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.62■■□□□ 1.53
TRIM60Q495X7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM60Q495X7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM60Q495X7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM60Q495X7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM60Q495X7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM60Q495X7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM60Q495X7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM60Q495X7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.61■■□□□ 1.53
TRIM60Q495X7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM60Q495X7 DUSP8P4-201ENST00000399538 1761 ntBASIC24.61■■□□□ 1.53
TRIM60Q495X7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.61■■□□□ 1.53
TRIM60Q495X7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM60Q495X7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TRIM60Q495X7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM60Q495X7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.6■■□□□ 1.53
TRIM60Q495X7 CD99P1-205ENST00000527459 561 ntBASIC24.6■■□□□ 1.53
TRIM60Q495X7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM60Q495X7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM60Q495X7 AC066615.1-201ENST00000640911 628 ntBASIC24.6■■□□□ 1.53
TRIM60Q495X7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
TRIM60Q495X7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.6■■□□□ 1.53
TRIM60Q495X7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms