Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 MIR572-201ENST00000384983 95 ntBASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 KRT18P5-201ENST00000436075 1291 ntBASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.18■■□□□ 1.78
SHROOM1Q2M3G4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 AC012414.1-201ENST00000556676 535 ntBASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.17■■□□□ 1.78
SHROOM1Q2M3G4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SHROOM1Q2M3G4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 AC027612.3-201ENST00000413684 1047 ntBASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 AC034268.1-201ENST00000441047 882 ntBASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SHROOM1Q2M3G4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.14■■□□□ 1.78
SHROOM1Q2M3G4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SHROOM1Q2M3G4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SHROOM1Q2M3G4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.14■■□□□ 1.77
SHROOM1Q2M3G4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 AC092437.1-201ENST00000624794 1048 ntBASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SHROOM1Q2M3G4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 AC022517.1-201ENST00000592429 346 ntBASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 AL358852.1-201ENST00000623174 1268 ntBASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SHROOM1Q2M3G4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SHROOM1Q2M3G4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SHROOM1Q2M3G4 CCDC92B-201ENST00000575506 885 ntBASIC26.11■■□□□ 1.77
SHROOM1Q2M3G4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
SHROOM1Q2M3G4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
SHROOM1Q2M3G4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SHROOM1Q2M3G4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SHROOM1Q2M3G4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms