Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.217e-6■■■■□ 21.2
EWSR1Q01844 BORCS8-MEF2B-201ENST00000354191 1695 ntTSL 216.21■□□□□ 0.197e-6■■■■□ 21.2
EWSR1Q01844 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.21■□□□□ 0.197e-6■■■■□ 21.2
EWSR1Q01844 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.94■□□□□ 0.147e-6■■■■□ 21.2
EWSR1Q01844 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.127e-6■■■■□ 21.2
EWSR1Q01844 CHID1-206ENST00000524538 553 ntTSL 215.62■□□□□ 0.097e-6■■■■□ 21.2
EWSR1Q01844 IGHMBP2-204ENST00000539064 2346 ntTSL 215.49■□□□□ 0.077e-6■■■■□ 21.2
EWSR1Q01844 NFIC-209ENST00000589969 614 ntTSL 315.21■□□□□ 0.037e-6■■■■□ 21.2
EWSR1Q01844 BORCS8-MEF2B-207ENST00000602804 1804 ntTSL 214.98□□□□□ -0.017e-6■■■■□ 21.2
EWSR1Q01844 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.9□□□□□ -0.027e-6■■■■□ 21.2
EWSR1Q01844 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.037e-6■■■■□ 21.2
EWSR1Q01844 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.48□□□□□ -0.097e-6■■■■□ 21.2
EWSR1Q01844 TBC1D24-204ENST00000566853 2507 nt14.48□□□□□ -0.097e-6■■■■□ 21.2
EWSR1Q01844 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.17e-6■■■■□ 21.2
EWSR1Q01844 BORCS8-MEF2B-208ENST00000630940 1664 ntTSL 213.65□□□□□ -0.227e-6■■■■□ 21.2
EWSR1Q01844 AHRR-202ENST00000504625 435 ntTSL 313.4□□□□□ -0.267e-6■■■■□ 21.2
EWSR1Q01844 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.29□□□□□ -0.287e-6■■■■□ 21.2
EWSR1Q01844 HDAC7-214ENST00000445237 364 ntTSL 413.2□□□□□ -0.37e-6■■■■□ 21.2
EWSR1Q01844 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.37e-6■■■■□ 21.2
EWSR1Q01844 TBC1D24-206ENST00000569874 3061 ntTSL 513.17□□□□□ -0.37e-6■■■■□ 21.2
EWSR1Q01844 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.12□□□□□ -0.317e-6■■■■□ 21.2
EWSR1Q01844 AHRR-210ENST00000514523 563 ntTSL 413.06□□□□□ -0.327e-6■■■■□ 21.2
EWSR1Q01844 IGHMBP2-202ENST00000536803 444 ntTSL 312.97□□□□□ -0.337e-6■■■■□ 21.2
EWSR1Q01844 ZNF775-202ENST00000490973 675 ntTSL 212.85□□□□□ -0.357e-6■■■■□ 21.2
EWSR1Q01844 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.377e-6■■■■□ 21.2
EWSR1Q01844 TBC1D24-208ENST00000630263 4180 ntTSL 512.5□□□□□ -0.417e-6■■■■□ 21.2
EWSR1Q01844 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.437e-6■■■■□ 21.2
EWSR1Q01844 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.23□□□□□ -0.457e-6■■■■□ 21.2
EWSR1Q01844 AHRR-206ENST00000510400 576 ntTSL 412.11□□□□□ -0.477e-6■■■■□ 21.2
EWSR1Q01844 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.517e-6■■■■□ 21.2
EWSR1Q01844 RHPN1-202ENST00000522335 3656 ntTSL 1 (best)11.67□□□□□ -0.547e-6■■■■□ 21.2
EWSR1Q01844 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.557e-6■■■■□ 21.2
EWSR1Q01844 BORCS8-MEF2B-204ENST00000602276 708 ntTSL 511.33□□□□□ -0.67e-6■■■■□ 21.2
EWSR1Q01844 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11□□□□□ -0.657e-6■■■■□ 21.2
EWSR1Q01844 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.667e-6■■■■□ 21.2
EWSR1Q01844 FAM207A-205ENST00000485207 504 ntTSL 210.93□□□□□ -0.664e-8■■■■□ 21.2
EWSR1Q01844 IGHMBP2-212ENST00000568742 540 ntTSL 410.9□□□□□ -0.667e-6■■■■□ 21.2
EWSR1Q01844 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.767e-6■■■■□ 21.2
EWSR1Q01844 BORCS8-MEF2B-205ENST00000602438 576 ntTSL 410.01□□□□□ -0.817e-6■■■■□ 21.2
EWSR1Q01844 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC9.96□□□□□ -0.827e-6■■■■□ 21.2
EWSR1Q01844 TBC1D24-202ENST00000562105 344 ntTSL 39.62□□□□□ -0.877e-6■■■■□ 21.2
EWSR1Q01844 TRAF2-202ENST00000414589 680 ntTSL 39.47□□□□□ -0.897e-6■■■■□ 21.2
EWSR1Q01844 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC9.44□□□□□ -0.97e-6■■■■□ 21.2
EWSR1Q01844 LDLRAP1-206ENST00000485476 238 ntTSL 58.83□□□□□ -17e-6■■■■□ 21.2
EWSR1Q01844 BORCS8-MEF2B-206ENST00000602689 554 ntTSL 38.03□□□□□ -1.127e-6■■■■□ 21.2
EWSR1Q01844 HDAC5-205ENST00000587135 504 ntTSL 214.22□□□□□ -0.132e-6■■■■□ 21.2
EWSR1Q01844 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.152e-6■■■■□ 21.2
EWSR1Q01844 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.78□□□□□ -0.22e-6■■■■□ 21.2
EWSR1Q01844 HDAC5-209ENST00000588703 445 ntTSL 313.27□□□□□ -0.292e-6■■■■□ 21.2
EWSR1Q01844 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.812e-6■■■■□ 21.2
EWSR1Q01844 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.121e-6■■■■□ 21.2
EWSR1Q01844 AGPAT3-208ENST00000448287 454 ntTSL 39.79□□□□□ -0.841e-6■■■■□ 21.2
EWSR1Q01844 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.88□□□□□ -0.354e-6■■■■□ 21.1
EWSR1Q01844 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.554e-6■■■■□ 21.1
EWSR1Q01844 BRD1-204ENST00000438393 3051 ntTSL 211.29□□□□□ -0.64e-6■■■■□ 21.1
EWSR1Q01844 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.74e-6■■■■□ 21.1
EWSR1Q01844 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC10.29□□□□□ -0.764e-6■■■■□ 21.1
EWSR1Q01844 NUCB1-203ENST00000411700 673 ntTSL 415.31■□□□□ 0.049e-7■■■■□ 21.1
EWSR1Q01844 NUCB1-204ENST00000424608 884 ntAPPRIS ALT2 TSL 514.78□□□□□ -0.049e-7■■■■□ 21.1
EWSR1Q01844 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.159e-7■■■■□ 21.1
EWSR1Q01844 NUCB1-207ENST00000452087 864 ntTSL 313.73□□□□□ -0.219e-7■■■■□ 21.1
EWSR1Q01844 NUCB1-206ENST00000451312 563 ntTSL 213.39□□□□□ -0.279e-7■■■■□ 21.1
EWSR1Q01844 CLCN7-214ENST00000569851 1014 ntTSL 513.23□□□□□ -0.292e-7■■■■□ 21.1
EWSR1Q01844 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.399e-7■■■■□ 21.1
EWSR1Q01844 NUCB1-205ENST00000443560 551 ntTSL 411.27□□□□□ -0.619e-7■■■■□ 21.1
EWSR1Q01844 NUCB1-211ENST00000485798 938 ntTSL 311.1□□□□□ -0.639e-7■■■■□ 21.1
EWSR1Q01844 MAD1L1-213ENST00000455998 557 ntTSL 414.75□□□□□ -0.051e-6■■■■□ 21.1
EWSR1Q01844 MAD1L1-206ENST00000429625 750 ntTSL 510.55□□□□□ -0.721e-6■■■■□ 21.1
EWSR1Q01844 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.42□□□□□ -0.262e-6■■■■□ 21.1
EWSR1Q01844 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.872e-6■■■■□ 21.1
EWSR1Q01844 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.462e-6■■■■□ 21.1
EWSR1Q01844 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.72■□□□□ 0.592e-6■■■■□ 21.1
EWSR1Q01844 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.28■□□□□ 0.362e-6■■■■□ 21.1
EWSR1Q01844 MAEA-218ENST00000513301 595 ntTSL 412.57□□□□□ -0.42e-6■■■■□ 21.1
EWSR1Q01844 MAEA-217ENST00000512842 550 ntTSL 410.74□□□□□ -0.692e-6■■■■□ 21.1
EWSR1Q01844 ASPSCR1-205ENST00000578236 3277 ntTSL 211.7□□□□□ -0.547e-7■■■■□ 21.1
EWSR1Q01844 LARP1-204ENST00000518297 2630 ntTSL 517.81■□□□□ 0.446e-8■■■■□ 21.1
EWSR1Q01844 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.28■□□□□ 0.684e-8■■■■□ 21.1
EWSR1Q01844 ALDH16A1-204ENST00000593417 2343 ntTSL 219.06■□□□□ 0.644e-8■■■■□ 21.1
EWSR1Q01844 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.51■□□□□ 0.554e-8■■■■□ 21.1
EWSR1Q01844 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.034e-8■■■■□ 21.1
EWSR1Q01844 ALDH16A1-207ENST00000599652 3995 ntTSL 212.44□□□□□ -0.424e-8■■■■□ 21.1
EWSR1Q01844 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.84■□□□□ 0.451e-6■■■■□ 21.1
EWSR1Q01844 PTPN12-216ENST00000523952 500 ntTSL 46.99□□□□□ -1.296e-7■■■■□ 21
EWSR1Q01844 PTPN12-209ENST00000460731 582 ntTSL 24.28□□□□□ -1.726e-7■■■■□ 21
EWSR1Q01844 MACROD1-207ENST00000543422 403 ntTSL 311.2□□□□□ -0.621e-6■■■■□ 21
EWSR1Q01844 GATD1-207ENST00000526650 457 ntTSL 311.92□□□□□ -0.52e-6■■■■□ 21
EWSR1Q01844 GATD1-208ENST00000528309 510 ntTSL 310.82□□□□□ -0.682e-6■■■■□ 21
EWSR1Q01844 GET4-205ENST00000441491 682 ntTSL 511.22□□□□□ -0.611e-7■■■■□ 21
EWSR1Q01844 ELL-204ENST00000596915 623 ntTSL 311.71□□□□□ -0.531e-6■■■■□ 21
EWSR1Q01844 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.21■□□□□ 0.516e-7■■■■□ 21
EWSR1Q01844 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.066e-7■■■■□ 21
EWSR1Q01844 KLF3-202ENST00000482150 517 ntTSL 210.46□□□□□ -0.736e-7■■■■□ 21
EWSR1Q01844 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.123e-6■■■■□ 21
EWSR1Q01844 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.982e-6■■■■□ 21
EWSR1Q01844 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.982e-6■■■■□ 21
EWSR1Q01844 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.28□□□□□ -0.283e-6■■■■□ 21
EWSR1Q01844 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.09□□□□□ -0.152e-6■■■■□ 21
EWSR1Q01844 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.692e-6■■■■□ 21
EWSR1Q01844 FAM102A-206ENST00000493175 423 ntTSL 39.54□□□□□ -0.882e-6■■■■□ 21
Retrieved 100 of 7,101 protein–RNA pairs in 76.3 ms