Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GABREP78334 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.23■□□□□ 0.99
GABREP78334 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
GABREP78334 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.23■□□□□ 0.99
GABREP78334 AC016769.1-201ENST00000409132 1010 ntBASIC21.23■□□□□ 0.99
GABREP78334 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABREP78334 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.23■□□□□ 0.99
GABREP78334 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABREP78334 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.23■□□□□ 0.99
GABREP78334 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.23■□□□□ 0.99
GABREP78334 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GABREP78334 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABREP78334 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GABREP78334 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.23■□□□□ 0.99
GABREP78334 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.22■□□□□ 0.99
GABREP78334 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.22■□□□□ 0.99
GABREP78334 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.22■□□□□ 0.99
GABREP78334 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
GABREP78334 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GABREP78334 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.21■□□□□ 0.99
GABREP78334 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GABREP78334 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GABREP78334 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
GABREP78334 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GABREP78334 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.21■□□□□ 0.99
GABREP78334 AP005435.1-201ENST00000529293 1178 ntBASIC21.21■□□□□ 0.99
GABREP78334 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.21■□□□□ 0.99
GABREP78334 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GABREP78334 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
GABREP78334 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.2■□□□□ 0.98
GABREP78334 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
GABREP78334 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.2■□□□□ 0.98
GABREP78334 AC137761.2-201ENST00000561729 223 ntBASIC21.2■□□□□ 0.98
GABREP78334 AC145350.3-201ENST00000569033 163 ntBASIC21.2■□□□□ 0.98
GABREP78334 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.2■□□□□ 0.98
GABREP78334 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GABREP78334 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.2■□□□□ 0.98
GABREP78334 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.2■□□□□ 0.98
GABREP78334 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.19■□□□□ 0.98
GABREP78334 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.19■□□□□ 0.98
GABREP78334 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GABREP78334 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GABREP78334 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GABREP78334 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GABREP78334 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.19■□□□□ 0.98
GABREP78334 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GABREP78334 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
GABREP78334 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GABREP78334 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GABREP78334 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
GABREP78334 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GABREP78334 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.18■□□□□ 0.98
GABREP78334 AC006015.1-201ENST00000429970 570 ntBASIC21.18■□□□□ 0.98
GABREP78334 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GABREP78334 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.18■□□□□ 0.98
GABREP78334 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
GABREP78334 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.18■□□□□ 0.98
GABREP78334 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GABREP78334 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GABREP78334 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GABREP78334 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GABREP78334 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.17■□□□□ 0.98
GABREP78334 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.17■□□□□ 0.98
GABREP78334 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.17■□□□□ 0.98
GABREP78334 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
GABREP78334 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.17■□□□□ 0.98
GABREP78334 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.17■□□□□ 0.98
GABREP78334 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GABREP78334 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.16■□□□□ 0.98
GABREP78334 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GABREP78334 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.16■□□□□ 0.98
GABREP78334 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GABREP78334 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.16■□□□□ 0.98
GABREP78334 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GABREP78334 FP325331.1-202ENST00000623531 1380 ntBASIC21.16■□□□□ 0.98
GABREP78334 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GABREP78334 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
GABREP78334 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.16■□□□□ 0.98
GABREP78334 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.16■□□□□ 0.98
GABREP78334 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.16■□□□□ 0.98
GABREP78334 DUX4L4-201ENST00000566884 1269 ntBASIC21.16■□□□□ 0.98
GABREP78334 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.16■□□□□ 0.98
GABREP78334 AC073111.5-205ENST00000641717 521 ntBASIC21.16■□□□□ 0.98
GABREP78334 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GABREP78334 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABREP78334 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms