Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAB38P57729 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB38P57729 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB38P57729 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB38P57729 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB38P57729 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RAB38P57729 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RAB38P57729 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB38P57729 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB38P57729 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB38P57729 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB38P57729 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB38P57729 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB38P57729 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB38P57729 AC011298.3-201ENST00000615796 283 ntBASIC20.94■□□□□ 0.94
RAB38P57729 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB38P57729 AC133637.1-201ENST00000624115 1537 ntBASIC20.94■□□□□ 0.94
RAB38P57729 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB38P57729 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RAB38P57729 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB38P57729 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB38P57729 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RAB38P57729 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB38P57729 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB38P57729 AL136162.1-201ENST00000607711 1078 ntBASIC20.93■□□□□ 0.94
RAB38P57729 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB38P57729 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RAB38P57729 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB38P57729 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB38P57729 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB38P57729 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB38P57729 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB38P57729 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAB38P57729 AC110285.6-201ENST00000617652 491 ntBASIC20.92■□□□□ 0.94
RAB38P57729 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB38P57729 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB38P57729 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB38P57729 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB38P57729 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB38P57729 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB38P57729 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAB38P57729 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB38P57729 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB38P57729 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAB38P57729 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB38P57729 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RAB38P57729 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB38P57729 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB38P57729 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB38P57729 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RAB38P57729 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB38P57729 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB38P57729 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB38P57729 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB38P57729 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB38P57729 AC135279.3-201ENST00000610945 1311 ntBASIC20.9■□□□□ 0.94
RAB38P57729 AC024257.2-201ENST00000549699 147 ntBASIC20.9■□□□□ 0.94
RAB38P57729 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RAB38P57729 AC136469.2-201ENST00000623944 1028 ntBASIC20.9■□□□□ 0.94
RAB38P57729 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB38P57729 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB38P57729 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB38P57729 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB38P57729 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB38P57729 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB38P57729 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RAB38P57729 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB38P57729 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.89■□□□□ 0.93
RAB38P57729 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.89■□□□□ 0.93
RAB38P57729 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB38P57729 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RAB38P57729 AL139246.5-201ENST00000606645 996 ntBASIC20.89■□□□□ 0.93
RAB38P57729 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.89■□□□□ 0.93
RAB38P57729 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RAB38P57729 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB38P57729 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB38P57729 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB38P57729 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB38P57729 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB38P57729 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAB38P57729 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RAB38P57729 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB38P57729 PBX2P1-201ENST00000493219 1291 ntBASIC20.88■□□□□ 0.93
RAB38P57729 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.88■□□□□ 0.93
RAB38P57729 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB38P57729 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB38P57729 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
RAB38P57729 AC004687.1-201ENST00000579003 1625 ntBASIC20.88■□□□□ 0.93
RAB38P57729 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB38P57729 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB38P57729 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAB38P57729 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB38P57729 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB38P57729 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB38P57729 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.87■□□□□ 0.93
RAB38P57729 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms