Protein–RNA interactions for Protein: P56181

NDUFV3, NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV3P56181 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFV3P56181 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFV3P56181 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFV3P56181 AC138932.1-201ENST00000534164 6830 ntBASIC14.35□□□□□ -0.11
NDUFV3P56181 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFV3P56181 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NDUFV3P56181 AL359504.2-201ENST00000605506 1601 ntBASIC14.35□□□□□ -0.11
NDUFV3P56181 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NDUFV3P56181 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFV3P56181 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NDUFV3P56181 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NDUFV3P56181 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NDUFV3P56181 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC14.34□□□□□ -0.11
NDUFV3P56181 SUZ12P1-203ENST00000578195 985 ntBASIC14.34□□□□□ -0.11
NDUFV3P56181 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NDUFV3P56181 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFV3P56181 LSR-205ENST00000427250 1606 ntTSL 2 BASIC14.33□□□□□ -0.11
NDUFV3P56181 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFV3P56181 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFV3P56181 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFV3P56181 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFV3P56181 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFV3P56181 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFV3P56181 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFV3P56181 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFV3P56181 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFV3P56181 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NDUFV3P56181 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFV3P56181 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFV3P56181 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFV3P56181 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFV3P56181 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFV3P56181 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFV3P56181 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NDUFV3P56181 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
NDUFV3P56181 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFV3P56181 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
NDUFV3P56181 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 MIR6089-201ENST00000616698 64 ntBASIC14.32□□□□□ -0.12
NDUFV3P56181 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NDUFV3P56181 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFV3P56181 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
NDUFV3P56181 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NDUFV3P56181 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFV3P56181 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFV3P56181 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 AC087289.5-201ENST00000586076 3175 ntBASIC14.31□□□□□ -0.12
NDUFV3P56181 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFV3P56181 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFV3P56181 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.31□□□□□ -0.12
NDUFV3P56181 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
NDUFV3P56181 LINC01521-201ENST00000504184 1943 ntBASIC14.31□□□□□ -0.12
NDUFV3P56181 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFV3P56181 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFV3P56181 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFV3P56181 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFV3P56181 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFV3P56181 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFV3P56181 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
NDUFV3P56181 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFV3P56181 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFV3P56181 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms