Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCNKAP51800 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCNKAP51800 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCNKAP51800 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLCNKAP51800 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLCNKAP51800 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.81■■□□□ 1.08
CLCNKAP51800 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.8■■□□□ 1.08
CLCNKAP51800 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCNKAP51800 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCNKAP51800 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLCNKAP51800 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CLCNKAP51800 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCNKAP51800 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLCNKAP51800 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCNKAP51800 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLCNKAP51800 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.8■■□□□ 1.08
CLCNKAP51800 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLCNKAP51800 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCNKAP51800 AC233992.3-201ENST00000607491 485 ntBASIC21.8■■□□□ 1.08
CLCNKAP51800 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLCNKAP51800 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.8■■□□□ 1.08
CLCNKAP51800 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLCNKAP51800 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.8■■□□□ 1.08
CLCNKAP51800 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLCNKAP51800 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLCNKAP51800 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.79■■□□□ 1.08
CLCNKAP51800 AL353803.4-201ENST00000565882 1934 ntBASIC21.79■■□□□ 1.08
CLCNKAP51800 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.79■■□□□ 1.08
CLCNKAP51800 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLCNKAP51800 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.79■■□□□ 1.08
CLCNKAP51800 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLCNKAP51800 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.78■■□□□ 1.08
CLCNKAP51800 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.78■■□□□ 1.08
CLCNKAP51800 CA15P2-201ENST00000611168 834 ntBASIC21.78■■□□□ 1.08
CLCNKAP51800 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLCNKAP51800 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.77■■□□□ 1.08
CLCNKAP51800 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.77■■□□□ 1.08
CLCNKAP51800 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.77■■□□□ 1.08
CLCNKAP51800 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.77■■□□□ 1.08
CLCNKAP51800 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.77■■□□□ 1.08
CLCNKAP51800 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLCNKAP51800 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLCNKAP51800 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLCNKAP51800 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.77■■□□□ 1.07
CLCNKAP51800 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCNKAP51800 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCNKAP51800 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCNKAP51800 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.76■■□□□ 1.07
CLCNKAP51800 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCNKAP51800 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCNKAP51800 AC099791.1-201ENST00000416440 715 ntBASIC21.76■■□□□ 1.07
CLCNKAP51800 OR2I1P-207ENST00000453522 948 ntBASIC21.76■■□□□ 1.07
CLCNKAP51800 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCNKAP51800 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CLCNKAP51800 AC008764.7-201ENST00000593779 1081 ntBASIC21.76■■□□□ 1.07
CLCNKAP51800 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLCNKAP51800 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CLCNKAP51800 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.76■■□□□ 1.07
CLCNKAP51800 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CLCNKAP51800 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCNKAP51800 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCNKAP51800 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCNKAP51800 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCNKAP51800 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CLCNKAP51800 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCNKAP51800 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CLCNKAP51800 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLCNKAP51800 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCNKAP51800 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.75■■□□□ 1.07
CLCNKAP51800 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCNKAP51800 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCNKAP51800 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CLCNKAP51800 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCNKAP51800 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCNKAP51800 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCNKAP51800 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLCNKAP51800 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLCNKAP51800 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCNKAP51800 AC092068.2-201ENST00000590491 1708 ntBASIC21.74■■□□□ 1.07
CLCNKAP51800 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLCNKAP51800 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLCNKAP51800 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLCNKAP51800 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.73■■□□□ 1.07
CLCNKAP51800 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CLCNKAP51800 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms